KEGG   Comamonas sediminis: ACQYWY_09165
Entry
ACQYWY_09165      CDS       T11250                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
csen  Comamonas sediminis
Brite
KEGG Orthology (KO) [BR:csen00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csen03400]
    ACQYWY_09165
Enzymes [BR:csen01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     ACQYWY_09165
    5.6.2.6  RNA 3'-5' helicase
     ACQYWY_09165
DNA repair and recombination proteins [BR:csen03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    ACQYWY_09165
SSDB
Motif
Pfam: WHD_Lhr DEAD_assoc DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: XTV02587
LinkDB
Position
2001237..2003930
AA seq 897 aa
MAELDHSPAPSDRAMQRAAKRWRDWLKAQDIGAAVFQQQAWRAYADGHSGLISAPTGRGK
TLAALGGPLMQAMAEAETPEGRASHGPRMLWVTPLRALASDTRERITGPVAAVLPHWQVA
MRTGDATSRDKRLTDTGKAQLVVITPESLALLLSHERSREQFSQLRSIVVDEWHELLPSK
RGVLLQLNLARIQALAPQAQVWGLSATIGNLQEASDVLLSAWQVQAPALIQDMRPKPFHL
HSITPPLGTRMPWAGHLGLANLGEVAKLVFSAPSTIVFTNTRAQAELWHTALASIWPEDA
ETLAIHHGSLDQGVRQSVEQRLRAGTLRCVVATSSLDLGVDFPAVERVIQIGGARSVARM
VQRAGRAKHRPGAAVHVEAVATQAMDLAEFAAVRELAEAQVYERREPLRLCFDVLSQHAM
SAALAGGFRPPELLAEVRRTAAFRDLSDAQWQAVLAFLEHGSDSLVQYPQYERLHCADGL
CQPANTGVVRMHRMSIGTITAHGAVNVQYLRGARLGSVEEAFIARLSPGDVFNFAGRSLV
LVRLENQTAWVRRSAEAGLLTPAWAGSLMPMSSSLGERMQQLLSTAAASPAADDAPHARE
LQWLQPLLQLQSQRSLVPGADQLLIEQVGNTQASQAAKAAPLFVYPFAGRVAHEGLAVLI
ATRLAHLQANTFAWACNEIGLMIQPTLPIDANAVDWAEIFKLDGLDTDLRSAVNFSELAR
KRFKEIAQIAGLVQSKVPGKKSRASDRQLQVSASLLFDVLSKYDPEHLLLRQARQEALDQ
ELHLPTMQRLLASIAGRQMALRFPARHTPFSFGLWAESFRGQLSNETWQDKVRRMAAQQE
RQAAGEPGPHTGAPRTRPSRSGAPSRGAAPPRPRAKGTPPQGTRTAARRTPQLQDRS
NT seq 2694 nt   +upstreamnt  +downstreamnt
atggctgagctggaccacagcccagcccccagcgaccgcgcaatgcagcgtgcggccaag
cgctggcgcgactggctgaaggcgcaggacataggcgcggccgtcttccagcaacaggcc
tggcgcgcgtatgcagacgggcacagcggtttgatatcggcgcccacaggccggggcaag
accttggcggcgctgggtgggccgttgatgcaggcgatggccgaggctgaaacgcccgaa
gggcgtgccagccatggcccgcgcatgctctgggtaacgcctttgcgcgccctggccagc
gacacccgcgaacgcatcaccggcccggtagcggcggtgctgccccattggcaggtggcc
atgcgcacgggagatgccacatcgcgcgacaagcggctgaccgataccggcaaggcgcag
ctggtggtgatcacgcctgaatcgctggcgctgctgctgagccatgagcgcagccgcgag
cagttcagccagctgcgcagcattgtggtggatgaatggcatgagctcttgcccagcaag
cgcggggtgctgctgcagctgaacctggcgcgcatccaggcgctggcaccgcaggcgcag
gtctggggcctgtcggcgacgattggcaatctgcaggaggccagcgatgtgctgctgagc
gcctggcaggtgcaggcgccggcactgatccaggacatgcggcccaagccgtttcatctg
cacagcatcacgccgccgctgggcacgcgcatgccctgggcggggcatttgggcctggcc
aatctgggcgaggtggccaagctggtgttcagcgcgcccagcacgattgtgtttaccaac
acccgcgcgcaggccgagctgtggcatacggcgctggccagcatctggccggaggatgcc
gagaccttggcgatccaccatggctcgctggaccagggtgtgcggcagtcggtggagcag
cgcctgcgcgcaggcactctgcgctgcgtggtggcaaccagcagcctcgatttgggcgtg
gattttccggcggtggagcgcgtgatccagattggcggcgcacgctctgtcgcccgcatg
gtgcagcgcgccggccgcgccaagcaccggcccggtgctgctgtgcatgtggaagcggtt
gccacccaggcgatggacctggccgagtttgccgccgtgcgcgagctggcagaggcccag
gtgtatgagcggcgcgagccactgcgcctgtgctttgatgtgctgagccagcatgcgatg
agcgcggcgctggcgggcgggttcaggccgccggagctgttggccgaggtgcggcgtaca
gcggcttttcgtgatctgagcgatgcgcagtggcaggcggtgctggcgtttttggagcat
ggcagtgattcgctggtgcagtacccgcagtatgaacgcctgcactgtgccgatggcctg
tgccagccggccaataccggcgtggtgcgcatgcaccgcatgtcgatcggcacgatcacc
gcgcacggcgcagtcaatgtgcagtacctgcgcggcgcgcggctgggctcggttgaagag
gcgtttattgcacggctcagccctggcgatgtcttcaactttgctggccgcagtctggtg
ctggtccggctggaaaaccagaccgcctgggtgcgccgcagtgccgaggcgggcctgctg
acccctgcctgggcaggctcgctgatgccgatgtcgtcatcattgggtgagcgcatgcag
cagttgctgagcacggccgctgccagccctgccgccgatgacgcgccgcatgcacgcgag
ctgcaatggctgcaaccgctgctgcagctgcaaagccagcgctcgctggtgccgggggcc
gaccagctgctgattgagcaggtcggcaacacccaagccagccaagccgccaaggccgca
ccgctgtttgtctacccctttgccggccgggtcgcgcatgaggggctggcggtgctgatc
gcgacgcgcctggcgcatctgcaggccaatacctttgcctgggcctgcaatgagatcggg
ctgatgatccagccgaccttgcccatcgatgcgaacgcggtggactgggcagaaatcttc
aagcttgacgggctcgacaccgatctgcgctcggcggtcaacttcagcgagctggcacgc
aagcgcttcaaggagattgcgcagattgccggcctggtgcaatccaaggtgccgggcaag
aagagccgcgccagcgaccggcagttgcaggtctccgccagcctgttgtttgacgtgctg
agcaagtacgaccccgagcatttgctgctgcgccaggcccggcaggaggcgctggaccaa
gagctgcacctgcccaccatgcaaaggctgctggccagcattgcggggcggcagatggcc
ttgcgctttccggccaggcacacgcccttctcgttcgggctgtgggcagagagctttcgc
ggccagctcagcaatgagacctggcaggacaaggtgcgccgcatggccgcccagcaggag
cgtcaggccgcaggcgagcctggaccgcacacgggcgcgcctcgcacccgcccatcccgc
agcggcgcccccagccgtggcgctgcacccccacgcccccgcgccaagggcaccccaccg
caggggacgcgtactgcagcgcgtcgcaccccacaactacaggatcgatcttga

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