Comamonas sediminis: ACQYWY_09350
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Entry
ACQYWY_09350 CDS
T11250
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
csen Comamonas sediminis
Pathway
csen03410
Base excision repair
csen03430
Mismatch repair
csen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACQYWY_09350 (recJ)
03430 Mismatch repair
ACQYWY_09350 (recJ)
03440 Homologous recombination
ACQYWY_09350 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csen03400
]
ACQYWY_09350 (recJ)
DNA repair and recombination proteins [BR:
csen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ACQYWY_09350 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ACQYWY_09350 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ACQYWY_09350 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
XTV02622
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All DBs
Position
2045239..2046972
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AA seq
577 aa
AA seq
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MKILARDIPPRTVWALEQAGVHPLLARLFAARGVQAADELDDGLGQLLPPAGLLGTREAA
LLLADAIGQQLRICVVADYDCDGATACAVALRGLRMLGARQVSYLVPDRVVDGYGLTPAI
AERVHQQGAQVLVTVDNGIASVDGVARAKALGMTVIVTDHHLPAATLPAADAIVNPNQPG
CGFASKAMAGVGVMFYVLMALRAELRERGAFADMAQPRLDSLLPLVALGTVADVVKLDAN
NRRLVAQGLRRIRAGHMPPGLGALFAAASRRAATASTFDFGFALGPRINAAGRLADMTIG
IECLLTDDTLLADTLARQLDAINRERRDIETGMREHAMLLAEALFEEGTEPPPAVSVFDP
DFHEGVVGIVASRIKDKLHRPTFVFAASSAPGHEHELKGSGRSIPGFHLRDALDLVAKRH
PGVLIKFGGHAMAAGCTIALDDFEVFEQALAQVAQEWLDERTLTRQLETDGPLPVQFRHA
ETVDTLNSQVWGQGFAPPTFSEELEIVSQRLVGEKHLSLKLRHHGEMVDGIWFGHTEPLP
AKVLLAYRLDINEWQGQRKLQFLVEGAQLPGGAGSSA
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctggcgagagatattcccccgcgtaccgtctgggcgttggagcaggcgggt
gtgcacccgctgctggcccggctgtttgcggcgcggggcgtgcaggctgcggacgagctc
gacgacggcctggggcagttgctgccgcctgcaggcttgctgggcacgcgcgaagcggcc
ctgctgctggccgatgccattggccagcagctgcgcatctgcgtggtcgccgattacgac
tgcgacggcgccaccgcttgcgccgtggccttgcgcggcctgcgcatgctgggcgcccgg
caggtcagctacctggtgcccgatcgtgtcgtcgatggctatggcctgaccccggcgatt
gccgagcgcgtgcaccagcaaggcgcgcaggtgctggtcaccgtggacaacggcatcgcc
agcgtggatggcgtggcgcgtgccaaggcgctgggcatgacggtgatcgtcaccgaccac
cacctgcctgcggccaccttgccggcggccgacgccatcgtcaaccccaaccagcccggc
tgcggcttcgccagcaaggcgatggccggtgtcggtgtgatgttctatgtgctgatggcg
ctgcgtgccgagctgcgcgagcgcggtgcctttgccgatatggcccagccgcgcctggac
agcctgctgccgctggtggcgctgggcacggtcgccgatgtggtcaagctcgatgccaac
aaccgccggctcgtggcccagggcctgcgccgcatccgcgccggccatatgccgcccggt
ttgggcgcgctgtttgcagcggccagccggcgtgcggccactgccagcacctttgacttc
ggctttgcgctaggcccccgcatcaatgcagccggccgtctggcggacatgaccatcggc
atcgaatgcctgctgaccgacgacaccttgctggccgacaccttggcacgccagctcgat
gccatcaaccgcgagcgccgtgacatcgagacgggcatgcgcgaacacgcgatgctgctg
gccgaggccctgtttgaagaaggcaccgagccgccaccggccgtcagcgtgtttgacccg
gatttccacgagggcgtggtcggcattgtcgcctcgcgcatcaaggacaagctgcaccgc
ccgacctttgtgtttgctgccagcagcgcaccgggccatgagcatgagctgaagggttcg
ggccgttcgatacccggtttccatctgcgcgatgcgctggacctggtggccaagcgccac
ccgggcgttctcatcaagttcggtggccatgcgatggcagcgggctgcacgattgcgctg
gacgattttgaggtgtttgagcaagcgctggcccaggtcgcgcaggaatggctggatgag
cgcacgctcacgcgccagctggagaccgacggtccgctgccagtgcagttccgccatgcc
gagaccgtggacacgctcaacagccaggtctggggccagggctttgcgccaccgaccttc
agcgaagagctggagatcgtcagccagcgcctggtcggtgaaaagcatttgtcgctgaag
ctgcgccaccatggcgagatggtggacggcatctggtttggccacaccgagcccttgccg
gccaaggtgctgctggcctatcggctggacatcaacgaatggcagggccagcgcaagctg
cagttcctggtcgaaggcgcgcagttgcccggtggagcagggtccagcgcttga
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