Comamonas sediminis: ACQYWY_09615
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Entry
ACQYWY_09615 CDS
T11250
Name
(GenBank) TIGR04028 family ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
csen Comamonas sediminis
Pathway
csen02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
csen00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ACQYWY_09615
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csen02000
]
ACQYWY_09615
Transporters [BR:
csen02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
ACQYWY_09615
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
XTV02670
LinkDB
All DBs
Position
complement(2098993..2100657)
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AA seq
554 aa
AA seq
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MKANKFKKLAVWSAAVLALGGLLAACSKNESVAEAKADTGPANGGALVYLEQQAHTNLYP
PAGGFYPNGGVLNQITDKLTYQDPKTLEIQPWIAKSWTINDSATEFTFELRPGVTFSDGT
PLDAAAVAKNFDTYGRGNKALKLPVSEVINNYERSEVLGPLTVKFYFSKPSPGFLQGTSV
IGSGLVALQTLERPFDELGDATKIIGSGPFVVASETLGKELVLSARKDYKWGPAQLAHQG
RARLDEVRFIVTPEDSVRIGALLSGQAGVIRQVQAYDEKRVEEQKFVIYAPSTRGVNNSI
VFRPDNALVADLKVRQALLHATNTQEVVQTLFSHNYPQATSVIASSALGYVNLASKLAYD
PQKAQQLLESAGWTPGPDGIRQKDGRALALAAYDSLPQPQNKETLQLVAQQWAKVGVKLQ
VLSGDAGVRIVDNLDPEKTPVAPGMVGRADPDVIKSNYYPTNRNVLLQQGGVSQKVKGFV
DPQLNGLLEAIAAQTDAQKRLALTAEVQNYLIDQAYVIPIFEEPQAFAAAPWVREVGFEA
VGRPSFYSTWLAKR
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagcgaataaattcaaaaaactggcggtatggagcgcggcagtgctggcgctgggc
gggctgctggcagcctgctccaagaacgagagtgtggccgaggccaaggccgacacgggc
ccagccaacggcggcgccctggtgtacctggagcagcaggcgcataccaatctctacccg
ccagccggtggcttctaccccaatggcggcgtgctcaaccagattaccgacaagctcacc
taccaggaccccaagacgctggagatccagccctggattgccaagagctggaccatcaac
gacagcgccaccgagttcacattcgagctgcgcccgggcgtgactttctccgatggcacg
ccgctggatgccgcagccgtggccaagaactttgacacctacgggcgcggcaacaaggca
ctcaagctgccggtgtccgaagtcatcaacaactacgagcgcagtgaggtgctgggcccg
ctgacggtgaagttctacttcagcaagccgtctccgggcttcctccaaggtacctcggtg
atcggctcgggcctggtggctttgcagaccttggagcgcccgtttgatgagctgggcgat
gccaccaagatcattggctcgggccccttcgtggtggccagcgaaaccctgggcaaggag
ctggtgctgtcggcccgcaaggactacaaatggggccctgcgcagctggcgcaccagggc
cgcgcgcgcctggatgaagtgcgctttatcgtcaccccggaagacagcgtgcgcatcggt
gcgctgctgtcgggccaggccggtgtgatccgccaggtgcaggcctatgacgaaaagcgg
gtggaggagcagaagttcgtcatctatgcgccgtccacgcggggggtgaacaacagcatt
gttttccggcccgacaacgcgctggtcgccgatctgaaggtgcgccaggcgctgctgcat
gccaccaatacccaggaggtcgtgcagacgctgttctcgcacaattacccgcaggccacc
tcggtgattgcgtccagcgcgctgggctatgtcaacctggccagcaagctggcctatgac
ccgcaaaaggcgcagcagctgctggagagcgcaggctggacaccggggccggacggcatc
cgccaaaaggacggccgtgcgctggcgctggccgcctatgactcgctgccccagccgcag
aacaaggaaaccctgcaactggtggcccagcagtgggccaaggtgggggtgaagctgcag
gtgctcagcggtgatgctggcgtgcgcattgtcgacaacctcgatccggagaagacgccg
gtggcacccggcatggtgggccgcgccgatcccgatgtgatcaagagcaactactacccg
accaaccgcaacgtgctgctgcagcaaggcggcgtcagccagaaggtcaagggctttgtc
gatccgcagctcaacggtttgctggaagcgattgccgcgcagacggacgcccagaagcgc
ctggcgctgaccgccgaggtgcagaactacctgatcgaccaggcttatgtgatccccatt
tttgaagagccgcaggccttcgccgctgcaccctgggtgcgcgaagtggggtttgaggcc
gtagggcgcccgagcttctacagcacctggctggccaagcgctga
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