Comamonas sediminis: ACQYWY_10360
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Entry
ACQYWY_10360 CDS
T11250
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
csen Comamonas sediminis
Pathway
csen03420
Nucleotide excision repair
csen03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACQYWY_10360
03430 Mismatch repair
ACQYWY_10360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csen03400
]
ACQYWY_10360
Enzymes [BR:
csen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACQYWY_10360
DNA repair and recombination proteins [BR:
csen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACQYWY_10360
MMR (mismatch excision repair)
Other MMR factors
ACQYWY_10360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_11
AAA_30
Motif
Other DBs
NCBI-ProteinID:
XTV02803
LinkDB
All DBs
Position
complement(2259579..2262032)
Genome browser
AA seq
817 aa
AA seq
DB search
MDSNDLFALPSDAGGDGHLPLLNGLNDEQLAAATLEGGHALILAGAGSGKTRVLTTRIAW
LLQTGRATPGGILAVTFTNKAAKEMLTRLSAMLPINVRGMWIGTFHGLCNRMLRAHYKSA
NLPQTFQILDTQDQLSAIKRLCKQFQVDEEALPPKQLQYFISGCKEEGLRPSDVQARDMA
ERKKVELYQLYEDQCLREGVVDFGELMLRSYELLRDNAPIRQHYQHRFRHMLVDEFQDTN
RLQYLWLKQLAGEMVGGQFQSHSSVIAVGDDDQSIYAFRGARVGNMQDFVREFEVRQQIK
LEQNYRSYSNILDSANALISHNSNRLGKNLRTDQGPGEPVRVSESATDMAEAQWMVEEIK
SLIKSDGFARSEIAVLYRSNAQSRILETSLFNAGVPYRVYGGLRFFERAEIKHALAYLRL
LENPHDDTSFMRVVNFPPRGIGARTTEQLQEGAQAAGCSLYDAVTAVAGKAGTKLQSFVA
MIDVLREETQGKTLRETIERMLVVSGLIEHYQTEKEGADRIDNLGELVTAAESFVTQEGF
GRDAVAIPLDEQQAMGVPGSGQSPVSQGLDPDAPLLDTPLPDAANPAIVNPDTGETLSPL
VAFLTHAALEAGDNQAQAGQDAVQMMTVHASKGLEFDVVFIGGLEEGLFPHENAMTDTGG
LEEERRLMYVAITRARKRLYLSTSQTRMLHGTTRYNVRSRFLDELPETALKWLTPRHSGF
GSGMGSLAYGGGGGGGRSSGGGYGDSAPSMWGKTPVPVQKAEPAHGIKKGANVFHNKFGE
GKVLAVEGTGDDARAQVNFPRHGTKWLALSVAKLTVV
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggattcgaatgatttgtttgcactgccgtccgatgcgggtggcgatgggcatttgccg
cttctcaatggcctcaacgacgagcaactggccgctgccaccttggaagggggccatgcg
ctgatcctggccggtgccggctcgggcaagacccgggtgctgaccacgcgcattgcctgg
ctgctgcagacgggccgtgccacgccgggcggtattctggcggtcacttttaccaacaag
gcggccaaggagatgctgacccgcctgtcggcgatgctgcccatcaatgtgcgcggcatg
tggatcggcaccttccacgggctgtgcaaccgcatgctgcgcgcgcattacaagtcggcg
aatctgccgcagaccttccagatcctggacacgcaggaccagctctcggcgatcaagcgc
ctgtgcaagcagttccaggtcgatgaggaagcgctgccgcccaagcagctgcagtacttc
atcagcggctgcaaggaagagggcttgcgcccctccgacgtgcaggcgcgcgacatggcc
gagcgcaagaaggtcgagctctaccagctctacgaagaccaatgcctgcgcgaaggcgtg
gtggattttggcgagctgatgctgcgctcctacgagctgctgcgcgacaacgctcccatc
cggcagcactaccagcaccgctttcgccacatgctggtcgacgagttccaggataccaac
cgcctgcagtacctgtggctcaagcaactggcgggcgagatggtgggcggccaattccag
tcccacagcagcgtgattgccgtcggcgacgatgaccagagcatttatgccttccgcggc
gcgcgggtgggcaacatgcaggattttgtgcgcgagttcgaggtgcgccagcagatcaag
ctggagcagaactaccgcagctacagcaatatcctcgacagcgccaacgcgctgatcagc
cacaacagcaaccggctgggcaagaacctgcgcaccgaccagggcccgggcgagccggtg
cgggtgtccgagagcgccaccgacatggccgaggcgcagtggatggtcgaggagatcaag
tcgctgatcaagagcgatggctttgcgcgcagcgagatcgccgtgctctaccgcagcaat
gcccaaagccggattctggaaaccagcctgttcaacgccggcgtgccttaccgcgtgtat
ggcggcctgcgctttttcgagcgtgcggaaatcaagcatgcgctggcctatctgcgcctg
ctggagaacccgcatgacgacaccagcttcatgcgggtggtgaactttccgccacgcggc
attggcgcccgcaccaccgagcagctgcaggaaggggcgcaggccgccggttgctcgctg
tacgacgcggtgacggccgtggccggcaaggcgggcaccaagctgcagtcctttgtcgcg
atgatcgatgtgctgcgcgaggaaacccagggcaagaccctgcgcgagaccatcgagcgc
atgctggtggtgagcggcctgatcgagcactaccagaccgaaaaggaaggcgccgaccgc
atcgacaacctgggcgaactggtgaccgctgccgaaagcttcgtcacccaggagggcttt
ggcagggatgccgtggccattccgctcgatgagcaacaggccatgggcgtgccaggcagc
ggccaaagccccgtcagccaggggctggacccagatgcgcctctgctcgacaccccgctg
cccgacgccgccaatccggccatcgtgaacccggacaccggcgagaccttgtcgccgctc
gtggcctttctcacccatgcggcgctggaggcgggcgacaaccaggcgcaggcgggccag
gacgccgtgcagatgatgaccgtgcatgccagcaagggtctggagtttgacgtggtgttc
atcggcgggctggaggagggcctgttcccgcacgagaacgcgatgaccgacaccggcggg
ctggaggaggagcgccgcctgatgtatgtggcgatcacgcgggcgcgcaagcgcctctac
ctgagcacctcgcagacgcgcatgctgcacggcaccacgcgctacaacgtgcgcagccgc
tttctggatgagctgcccgagacagcactcaaatggctcacgcccaggcactccggcttt
ggcagcggcatgggcagcctggcttacggcgggggcggcggcggtggtcgctcgtcgggc
ggtggctatggtgattccgcgcccagcatgtggggcaaaacccccgtgccggtgcaaaag
gctgagcccgcgcatggcatcaagaagggcgccaatgtgttccacaacaagtttggcgaa
ggcaaggtgctggcggtggaaggcacgggcgacgatgcccgcgcccaggtgaattttccg
cgccacggcaccaagtggctggcgctgtcggtggccaagctcacggtggtctga
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