Comamonas sediminis: ACQYWY_11930
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Entry
ACQYWY_11930 CDS
T11250
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
csen Comamonas sediminis
Pathway
csen00470
D-Amino acid metabolism
csen00550
Peptidoglycan biosynthesis
csen01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csen00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ACQYWY_11930 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ACQYWY_11930 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
csen01011
]
ACQYWY_11930 (murD)
Enzymes [BR:
csen01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
ACQYWY_11930 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
csen01011
]
Precursor biosynthesis
Amino acid ligase
ACQYWY_11930 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
AlaDh_PNT_C
2-Hacid_dh_C
Sacchrp_dh_NADP
NAD_binding_7
DUF3306
ThiF
3HCDH_N
NAD_binding_2
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
XTU98715
LinkDB
All DBs
Position
complement(2598223..2600208)
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AA seq
661 aa
AA seq
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MSTEHLHPLDPSAEAAAAPLTPAVAPVAATGVAQPDGLQPEAAAPGADAQPPAPPLPADG
VTVEAAAEEAAAVATDAADAAAAPAAEAPAADMAPVPDVSTLTAAKDAAAFVAQIFADPG
VSDAASSEVTAVDIQPQEAEVVYAPVPAQWPQGQEHALQGQHVLVLGLGTSGLAMARWCA
RCGAQVTVADTREAPPQLAQLRSELPDVRFVAGALTAALVDGQPVRVVYRSPGLSPETVA
PVVDAARAIGLPVSGELDLFSLALQSLAQAHGYVPKVLAITGTNGKTTVTSLTGQLLAHA
GMSTAVAGNIGPSLLDTLSQHIDAQSLPQAWVLELSSFQLEDAHAFNPTAATVLNLSQDH
LDWHGSMAAYAGAKAKIFGSDALMVLNRDDPAVMAMLPPPVRIKLQRPQLRPHISFGLDL
PTQPGDYGLEVVNGMAWLVRAQDDGNSASNKRNQTAADDVFLQRLMPADALRIRGRHNAM
NALAALALGHAAGAGFAPMLFGLREYRGERHRVEPIGIVSDVEYFDDSKGTNVGATVAAL
MGLGAERRIVLILGGEGKGQDFSPLAAPVLRYARAVVLIGRDAPLIEAALADTGVPLLHA
PSMDEAVLLASQKAVAGDAVLMSPACASFDMFKNYGHRAEVFCQAVAALAEERGTSLEVQ
P
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccgagcacctccacccccttgatccctcggcagaggccgcggctgcgccattg
acgccggcagtggcgccggtggctgcgacaggcgtggcccagcctgacgggctgcagcct
gaagcggcagcacctggcgccgatgcacagccaccggccccgcctttgccggcggatggt
gtgacggtggaggctgctgcagaagaggcagccgcggtcgccaccgatgctgcagatgca
gcagcggcgccggctgccgaagcgccggcggcggacatggcgccggttcccgatgtgtcg
accctgacggccgccaaggacgcggccgcctttgtggcgcagattttcgccgatcctggc
gtgtccgatgctgccagcagtgaagtgaccgccgtggatatacagccgcaggaggccgag
gtggtttatgccccggtgcctgcgcagtggccgcaggggcaggagcatgcgctgcaagga
cagcatgtgctggtgctgggcctgggtacttccggtctggcgatggcgcgctggtgtgcg
cgctgcggcgcccaggtgacggtggccgatacacgcgaggctccgccccagttggcacag
ctgcgcagcgagctgcccgatgtgcgctttgtcgcgggcgctttgaccgccgcgctggtc
gatggccagccggtgcgcgtggtctaccgctcgcccggcttgagccccgagacagtggcg
cctgtcgtcgatgcggcgcgcgccattggcttgccggtcagcggtgagctggatctgttc
agcctggccctgcagtcgctggcccaggcgcatggctatgtgcccaaggtgctggcgatc
acggggaccaatggcaagaccacggtgacctcgttgacgggacagctgctggcccatgcc
ggcatgtccaccgctgtggccggcaatatcggccccagcctgcttgacacgctgtcgcag
cacatcgatgcgcaaagcctgccgcaggcctgggtgctggagctgtccagcttccagctc
gaagatgcgcatgctttcaacccgacggcggcgacggtactcaacctcagccaggaccac
ctggactggcatggcagcatggcggcctatgcgggcgccaaggccaagattttcggcagc
gatgcgctgatggtgctcaaccgcgacgacccggccgtgatggccatgctgccgccaccg
gtgcgcatcaagctgcagcgcccccaactgcgcccgcacatcagctttgggctggatctg
cccacccagccgggcgactatggcctggaagtggtcaacggcatggcctggctggtgcgt
gcacaggacgatggcaacagcgccagcaacaagcgcaaccagacggcagcggacgatgtg
ttcctgcagcggctgatgcctgctgacgcgttgcgcatccggggccgccacaacgcgatg
aatgcgctggccgcgctggcgctgggccatgcagcaggcgccggttttgcgccgatgctg
tttggcctgcgcgaataccggggcgagcgccaccgggtcgagcccatcggcatcgtcagc
gatgtggaatattttgacgacagcaagggcaccaatgtgggtgccaccgtggccgcgttg
atgggcctgggtgccgagcgccgcatcgtgctgatcctgggcggcgagggcaagggccag
gatttctcgccgctggccgcgcctgtgctgcgctacgcgcgcgccgtggtgctgattggc
cgcgatgcgccgctgatcgaggctgcactggccgacaccggtgtgcccctgctgcacgcg
cccagcatggacgaagccgtgctgctggccagccagaaggccgtcgccggcgacgctgtg
ctgatgtcccccgcctgcgccagctttgacatgttcaagaactacggccaccgcgccgag
gtgttttgccaggccgtggcggcgctggctgaagagcgcggcaccagtctggaggtgcag
ccatga
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