Comamonas sediminis: ACQYWY_13875
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Entry
ACQYWY_13875 CDS
T11250
Name
(GenBank) ligand-gated channel protein
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
csen Comamonas sediminis
Brite
KEGG Orthology (KO) [BR:
csen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csen02000
]
ACQYWY_13875
Transporters [BR:
csen02000
]
Other transporters
Pores ion channels [TC:
1
]
ACQYWY_13875
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
BBP2
Motif
Other DBs
NCBI-ProteinID:
XTU99050
LinkDB
All DBs
Position
complement(3023093..3025147)
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AA seq
684 aa
AA seq
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MSSSASLAAGRAPARPLRLDFHRLPSASQRHALRAIASVVAGMLVHGAAAAQAADATDAA
EQVASDKTLGTVVVTAAGFEQEVTQAPASITVIPREKLEQGAYSNLHDALRDVPGVIMTP
SDNNSNDISLRGMGANYTLILVDGKRMSTRETQTNGSTGTDQSWVPPLEAIERIEVVRGP
MSSLYGSDAMGGVVNIITRKVAKQWHGSLRADATLQERSESGNAYQSNFYISGPIKEEML
GISLYGNYSKRDEDRIYQGYNDSDTQALNARIALTPNKDHDIIAELGSARQHFISTPGKT
LLETGALSDRKFERENYSLQHKGRWGWASSDTYVQHEKTRNISREMTIKNTVANSSWVIP
VGDAHIVSTGLYYNQQDLTDTTTNTLPGSNRTTADRTQYAWFAEDEWRLREDFALTSGLR
FDHDSKGGSQWSPRLYGVWNLNPRWTVKGGVSTGFRAPSLRQTLGDWGQASRGGNIYGNP
DLKPEKSLSKEVGVLYNDGAGLSAGLTVFDNDFRDKITRIACPECGPLNSSGNTPTTNIN
IDKAVTRGIEATFTMPLARSLDLNSSYTFTRSEQKSGEFAGQPLSQLPRHMLNVALDWKP
SDRWNGWTKLSYRGKESQPTGGRSARTWVAGSYAMFDVGGSFHYNKNTTFFAAIYNLFDK
DVYYEDYATVQDGRRYWVGMNLKF
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcctctgcctcgttggcagcaggtcgcgcgccagcacggcctctgcgtcttgat
ttccaccggctgccatcggcatcccagcgccatgcactgcgcgccatcgccagcgtggtg
gccggcatgctggtccatggcgcagcagcagcgcaggccgccgatgccaccgatgctgcc
gagcaggttgccagcgacaaaacactgggcaccgtggtggtgacagcggcgggctttgag
caggaggtaacccaggcaccggcctcgatcaccgtgatcccgcgtgagaagctggagcag
ggcgcctacagcaacctgcacgatgccttgcgcgatgtgccgggcgtcatcatgacgccg
tcggacaacaactccaacgacatcagcctgcgcggcatgggtgccaactacaccttgatc
ctggtggacggcaagcgcatgagcacccgcgagacgcagaccaatggctcgacggggacc
gaccaaagctgggtgccgccgcttgaagcgatcgagcgcatcgaggtggtgcgcgggccg
atgtcctcgctctacggatcggacgcgatgggcggtgtggtcaacatcatcacgcgcaag
gtggccaagcagtggcatggctcgctgcgtgccgatgccaccttgcaggagcgctccgag
tccggcaatgcctaccagagcaacttctacatctcgggcccgatcaaggaagagatgctg
ggcatcagcctctacggcaactacagcaagcgcgatgaagaccgtatctaccagggctac
aacgacagcgatacccaggcgctcaacgcccgcattgcgctgacgccgaacaaggaccac
gacatcattgccgaactgggctcggcccggcagcacttcatctcgacccccggcaagacc
ttgctggagaccggtgcgctgtccgaccgcaaatttgagcgcgagaactattcgctgcag
cacaagggccgctggggctgggcctcgtccgatacctatgtgcagcatgagaagacccgc
aacatctcgcgcgagatgaccatcaagaacacggtggccaacagcagctgggtgattccg
gtgggcgacgcgcacatcgtcagcaccggcctgtactacaaccaacaggacctgaccgac
acgaccaccaacaccttgcccggcagcaaccgcaccacggccgaccgcacgcagtacgcc
tggtttgccgaagacgaatggcgcctgcgcgaggactttgcgctgaccagcggcctgcgt
tttgaccacgacagcaagggcggatcgcaatggagcccgcgcctgtatggcgtatggaac
ctgaacccgcgctggaccgtcaagggcggtgtctccaccggtttccgcgcaccctcgctg
cgccagacgctgggcgactggggccaggccagccggggcggcaatatctatggcaacccg
gatctgaagccggagaaatcgctgtccaaggaagtgggcgtgctctacaacgatggtgcc
ggcctgtcggcggggctgacggtgtttgacaacgacttccgcgacaagatcacccgcatt
gcctgccccgagtgtggcccgttgaattcgtcgggcaacacgcccacgaccaatatcaat
atcgacaaggcggtgacacgcggcatcgaggccacctttaccatgccgctggcgcgcagc
ctggacctgaactccagctacaccttcacccggtccgagcagaagagcggcgagtttgcc
ggccagccgctgtcgcagctgccgcgccacatgctcaacgttgcactggactggaagccc
tcggaccgctggaacggctggaccaagctgtcctaccgaggcaaggaaagccagcccact
ggcggccgctcggcccgcacctgggtcgctggcagctatgcgatgttcgatgtgggcggc
tcgttccactacaacaagaacaccaccttcttcgccgctatctacaacctgttcgacaag
gacgtgtactacgaagactacgccaccgtgcaggacgggcgacgttactgggtgggcatg
aacctcaagttctaa
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