Comamonas sediminis: ACQYWY_14465
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Entry
ACQYWY_14465 CDS
T11250
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
csen Comamonas sediminis
Pathway
csen00550
Peptidoglycan biosynthesis
csen01100
Metabolic pathways
csen01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
csen00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ACQYWY_14465 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
ACQYWY_14465 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
csen01011
]
ACQYWY_14465 (mrdA)
Enzymes [BR:
csen01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
ACQYWY_14465 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
csen01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
ACQYWY_14465 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
bDLD3
Motif
Other DBs
NCBI-ProteinID:
XTU99155
LinkDB
All DBs
Position
complement(3134794..3136746)
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AA seq
650 aa
AA seq
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MTEIQNSDRAFSRFRLRVVVIGLVVVLCFGILLSRLYVLQIERHDDLLAQAESNRTAVVP
IVPNRGQIYDRNGVLLATNYSAYTLEITPYKVSDVEETIDALSELIEITPRDRRRFKRLR
EDSRNFDSLPIRSRLTDQEVAKFAAQRYRFPGVDVKARLFRSYPMGETGAHLIGYIGRIN
QREKERIDDSDEAANYRGTEYIGKTGVEASYEKELHGHTGVERMETSAGGHAVRKLDSSP
ATPGESVVLSVDIKLQKMVEDLYGERRGVAIAIDPRSGELLAMVSKPTFDPNIFVEGIDQ
ESWKALNESIDRPLLNRAMRGTYPTGSTYKPFMGLAGLETGKRTPSTIIQDGGSWTFGGH
TFRSGHALGPVDLNRAIQHSSNVYFYTLANEMGVDAIHDFMKPLGFGQITGIDLPGEVRG
VLPSTTWKRETYKRPEQKRWYAGETISLGIGQGYNNFTILQLTHALATILDNGNSRVPHV
GRSLIDPVTGERRPIEQPPPVNLGYKQSNMDAVKRGMVSVVTGGTGRGSFGTARYTAGGK
TGTAQAISIGQKEKYNAARLAERQRDHALYIAFAPAEDPKIAVGVIVENAGFGAGSAAPI
ARRIIDYWLLGEYPSEADIAAMQRGDGRAPMGTPRRVEDIQLKPQTEPPQ
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagatccagaactcagaccgtgccttcagccgttttcggctgcgggtggtcgtc
atcggtctggtggtcgtgctgtgcttcggcattctgctgtcacgcctgtatgtgctgcag
atcgagcgccatgatgacctgctggcgcaggccgagagcaaccgcacggcggtggtgccc
atcgtgcccaaccggggccagatctatgaccgcaatggcgtgctgctggccaccaactac
tcggcctacaccttggagatcacgccctacaaggtgagcgacgtggaagagaccatcgat
gcgctgtccgagctgatcgagatcacgccgcgcgaccgccgccgcttcaagcgcctgcgt
gaggattcgcgcaacttcgactcgctgccgatccgctcgcgcctgaccgaccaggaagtg
gccaagtttgccgcccagcgctaccgcttccctggcgtcgatgtgaaggcacgcctgttt
cgctcctacccgatgggtgagaccggtgcccatctgatcggctatatcggccgcatcaac
cagcgcgagaaggagcgcatcgacgactccgacgaagcggccaactaccggggcaccgaa
tacatcggcaagaccggcgtggaggccagctacgagaaggaactgcacggccacaccggc
gtcgagcgcatggaaacgtcggccggcggccatgcggtgcgcaagctcgacagctctccg
gccaccccgggcgagagcgtggtgctgtcggtggacatcaagctgcagaagatggtcgag
gacctgtatggcgagcgccggggcgtggccattgcgatcgacccgcgcagcggcgagctg
ctggccatggtcagcaagcccaccttcgaccccaatatctttgtcgaaggcattgaccag
gaaagctggaaggcgctgaacgaatccatcgaccggcccctgctcaaccgggcgatgcgc
ggcacctacccgaccggctcgacctacaagcccttcatggggctggccgggctggagacg
ggcaagcgcaccccgtcgaccatcatccaggacggcggcagctggacctttggcggccac
accttccgctccggccatgcgctgggccctgtcgatctgaaccgcgcgatccagcattcg
agcaatgtctatttctacaccctggccaatgaaatgggtgtggatgcgatccatgacttc
atgaagccgctgggctttggccagatcaccggcatcgacctgcccggtgaagtgcggggc
gtgctgcccagcaccacctggaagcgcgaaacctacaagcgccccgagcaaaagcgctgg
tatgccggtgagaccatctcgctgggcattggccagggctacaacaacttcacgattctg
caactgacccatgcgctggcgacgatcctggacaacggcaacagccgggtgccacatgtg
ggccgttcgctgatcgacccggtgaccggcgagcgccgccccatcgagcagccgccgccc
gtgaacctgggctacaagcaaagcaatatggatgcagtcaagcgcggcatggtgtcggtg
gtgacgggtggcaccgggcgcggttccttcggcacggcccgctatacggccggcggcaag
accggcacggcccaggccatcagcattggccagaaggaaaagtacaatgccgcgcgtctg
gccgagcgccagcgcgaccatgcgctgtacatcgcgtttgcaccggccgaagacccgaag
atcgccgtcggcgtgatcgtggaaaacgctggctttggcgccggctcggctgccccgatt
gcccgccgcatcatcgactactggctgctgggtgaataccccagcgaggccgatattgcc
gcgatgcagcgcggcgatggccgtgcgccgatgggcacgccaaggcgcgtcgaagatatc
cagctgaagccgcagaccgagccaccgcagtaa
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