Comamonas sediminis: ACQYWY_16145
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Entry
ACQYWY_16145 CDS
T11250
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
csen Comamonas sediminis
Pathway
csen02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
csen00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ACQYWY_16145
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csen02000
]
ACQYWY_16145
Transporters [BR:
csen02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
ACQYWY_16145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
IFRD_C
Motif
Other DBs
NCBI-ProteinID:
XTU99482
LinkDB
All DBs
Position
3509007..3510677
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AA seq
556 aa
AA seq
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MQASSGFSVSRPALKSLALAVTLALGAGAALAQEKVLRIAMTAGDIPRTSGQPDQGFEGN
RFTGIPMYDALTQWDLSKADKPSELVPGLALSWEVDAKDKTKWLFKLRPGVKFHDGSAFN
ADAVVWNVNKVLDKEAEQFDPAQVGVTASRMPTLKSARKIDDLTVELTTTEPDSFLPINL
SNLFMASPAHWAKKLAAVPASVSGKAERSKAAWTAFAADPSGTGPFKGARLVPRERFEMV
KNASYWDPKRTPTIDKVVLLPLPEANSRTAALMSGQVDWIEAPAPDALDAIKARGFKLYS
NLQPHIWPWQFSFVEGSPWLDKRVRHAANLCVDRASMKQLLNGQMEPATGIFEPGHPWRG
SPSFQIKYDVKAAQALMTQAGYSASKPIKVKIQTSASGSGQMQPLPMNEFIQQNLKECFF
DVEFDVVEWNTLFSGWRLGAKDPGANKASATNVTAATMDPFFAMVRFVSTKSFPPLSNNW
GFYSNKQVDAVVDKARTTFDAKERDKALAELHTLVVDESPFLFVAHDVGPRAMSAKVGNV
VQPQSWFIDIATMTMK
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcgtcttccggtttctccgtctcccgtcccgcgctcaaaagcctggctctggct
gtcaccctggcgctgggcgcaggtgctgccctggcccaggaaaaggtgctgcgcattgcg
atgactgcgggcgatatcccgcgcacctcgggccagccggaccagggttttgaaggcaac
cgtttcaccggcattccgatgtatgacgcgctgacccagtgggacctgagcaaggccgac
aagcccagcgaactggtgccgggcctggcgctctcgtgggaggtggatgccaaggacaaa
accaagtggctgttcaagctgcgccccggggtcaagttccacgacggcagcgccttcaat
gccgatgccgtggtctggaacgtgaacaaggtgctggacaaggaggccgagcagtttgac
ccggcccaggtgggcgtgaccgcatcgcgcatgccgacgctcaagtccgccaggaagatc
gatgacctgacggtggagctgaccaccaccgagcccgactccttcctgccgatcaacctg
agcaatctgttcatggcctcgcccgcgcactgggccaagaagctggctgcagtgccggcc
tccgtcagcggcaaggccgagcgcagcaaggccgcatggacggcgttcgccgccgacccc
tcgggcaccggccccttcaagggcgcgcgcctggtgccgcgtgagcgcttcgagatggtg
aagaacgccagctactgggaccccaagcgcacgccgaccatcgacaaggtggtgctgctg
ccgctgcccgaggccaactcgcgcactgccgcgctgatgagcggccaggtggactggatc
gaggcgccggcgcccgatgcgctcgatgcgatcaaggcacgcggcttcaagctctattcc
aacctgcagccccacatctggccatggcagttctcgtttgtggaaggctcgccctggctg
gacaagcgcgtgcgccatgccgccaacctgtgcgtggaccgtgccagcatgaagcagctc
ttgaacggccagatggagccggccaccggcatctttgagcccggccacccctggcgcggc
agccccagctttcagatcaagtacgacgtgaaggccgcgcaggcgctgatgacccaggcc
ggctacagcgccagcaagcctatcaaggtgaagatccagacttcggcctcgggctcgggc
cagatgcagccgctgccgatgaacgagttcatccagcagaacctcaaggaatgcttcttt
gatgtggagttcgatgtggtggagtggaacacgctgttctccggctggcgcctgggcgcg
aaggacccgggtgccaacaaggccagcgccaccaatgtgacggccgccacgatggacccc
ttctttgcaatggtgcgctttgtcagcaccaagtccttcccgccgctgtccaacaactgg
ggcttctacagcaacaagcaggtcgatgcggtggtggacaaggcccgcaccacctttgat
gccaaggagcgcgacaaggccctggccgagctgcacaccctggtggtcgatgagtcgccg
ttcctctttgtcgcccacgatgtgggcccgcgcgcgatgtcggccaaggtcggcaacgtg
gtgcagccgcaaagctggttcatcgatatcgcgacgatgacgatgaagtaa
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