Comamonas sediminis: ACQYWY_16465
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Entry
ACQYWY_16465 CDS
T11250
Name
(GenBank) pilus assembly protein
Organism
csen Comamonas sediminis
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
Motif
Other DBs
NCBI-ProteinID:
XTU99546
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Position
3576201..3582074
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AA seq
1957 aa
AA seq
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MLQKFKPQLRWPRAASLWAMLAAATVVAGLFASNAAADSTSSDAVDIADIPLGILGDQTK
PNVMLLLDTSDSMKWSHMPDGWERRETKYFPVGYKSALCNALYYNPDTSYPLPKQADGTT
DMPVPTFSAAWKDGYDQSQGVVNLATSFQAYDANTRSRDLYVDPPQRAYHFVWTPRDSRF
PTMPSWEREETCTWPAEPKLFDDDGSVQVSDLVNMFVSGVPNGRVTGRWSRVRITAAQER
NFAIWYSYYRTRINMAKSSVSLAFGTLNDNFRIGFMTVAKPGSGAHSHFLPVKDFWGTDK
QTWFQTIQSAKTGGTSPTREALARVGRYYAGKSDSINDTMLPFVDPVISACQRHYTIVTT
DGYWNTGQETKGRGPVQIDGVTLVGQQDGPPLGLTPPEGLIPRPIYDGSVSGHRLEHDAD
VSYGLGECTLGWRVTVPGGGTKTETTYKKIVKKDVIRRSWYSADLNWWQKTNTQVMRISH
KAASGDGKYGKSESQYWHVQGTHRQTKNLYQQRIIWYYVNKTQYRNKLLTTWSTETQTPW
ARAVARQVREKRYFYWYKNPALGEVELKTTDRAVCEAFASGCQVEPAGGDSWKVVESCIP
GSAGDYKVECEGPTEREISASTYCSRNGQYVPGVGSIACQGVAVPPYSGPVLACNSLHPQ
LAADIAAAGGSSAMVEYSNCDRSHREERYVSQDECINVAATQANGFRSTTCTREAANGPE
GETDNSCQITSAPVWDAASHTYTECRQRSASEMVAICEPGNLPDQPGRINTLCEGRGRPA
SSTIVAPSACQAGIEGDYAVECTNAQSSWSGPISPETRICRTNFGHEYDLSCEERRTPWR
EVQSCTPEAPTPLNGWVGTDCTDEPVTPPGPGFCRPAPGKEGIEPPAPMPADPAACQPQE
ATPENGCIYSTCQRNESFEDVASCTPQSASSPSWIATSCQRRQQGGRPRPDCQGPVEGYK
AVANCQPRSIEGSIGYGTCEAIVASEPGAGRPVAENNWQTTTCESIDESTPDGVVYLQSE
ADFAACKAGKDEHGVETQCVQDGPHTIDVPQGELCVPGYNPTTHKVTDCSGVGVGSTTIE
PTKPDHCPPETCEEAKGSKKIFNGTYQTHRITLTGTAETGRTLVRPPGEVPFNGDLESPA
ICYPHEPAPQLPPAGRPQPGTAPWAALPATHTRCGSLPCNEDHLNPATGGSSNSLADVAQ
YYYATDLRPGGESDTPRGWPNQVRPVGTGAEDDKATWQHMSTYVIGMGVSGTLKYHKDYK
AGAGDFADLRSGLKTWPIWPREGANEESPESIDDFWHTAVNGRGLYFSANDPSAIQSGLA
EVFADIRAALGSGGSVGVTSPITEAGNNFAYAATYRTGRWSGDLQAFEIGLSSGKRTQIE
GWSAKDALDRRDLATDNRRILFMNGGRLAEFTYANLGSLRSHFETSAISTRLAQYAQMSD
AQKEAAQGANLVNYLRGDRSLEDFALGDVRKLYRPRESRLGDIISSQPLYVGKPTRRYRD
AGYAAYRLSQQNRRPMVYVGGNDGMLHAFHAETDLRKTETIGGRTVPVAAREAWAFVPTA
VMPEMARLASVDYDSAHRYFVDGSPVVADIHDGSAWKTILVGGFNKGGKGYYALDITNPL
QPQPLWEASLPEMGLSFGRPMVSKHPNGTWAVFLTSGYNNADGKNHVFVLNASTGAVIEQ
MTTPSGSGLREINNYLRDPAGDNTTRLLYGGDLDGNVWRFQWDVAASRFQVQRVVQLTDQ
PITTRIELVQGSTQLPRILVATGRLFGSADMTDYSEQSIYGFDDKPEGYAISADSFRADL
KKSELRATTDVTGKIVRTLRCTSRDHAVCNDRRKGWYVDLPDRGERVNVNMQLAGTTLVV
ASNVPSDEPCLAGGYGWLNYLNFETGLAVNGNPEGGPAGEQVPDTMIVGNALTANRDGTV
TSHIQTGVVGKPIDIVIPVATPKPQGKRISWREAVTN
NT seq
5874 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaaaattcaaaccccagctgcgatggccccgggccgcaagcctgtgggccatg
ctcgctgccgccaccgtagtggctggcttgtttgccagtaacgcagccgccgactccaca
tccagcgatgcggtcgatattgccgatatcccgctgggcattctgggcgaccagaccaag
cccaatgtgatgctgctgctcgacacctcggattcgatgaaatggagccacatgcccgat
ggctgggagcggcgtgaaaccaagtacttcccggtgggctacaaaagcgcgctgtgcaac
gcgctttactacaaccccgataccagctacccgctgcccaagcaggccgatggcaccacc
gacatgcccgtgccgactttctccgccgcttggaaggacggctacgaccagtcgcagggc
gtcgtcaatctcgctacctcatttcaggcatacgacgctaatacgcgcagccgtgacctc
tacgtcgatccaccgcagcgtgcctatcacttcgtttggacgcctcgcgacagccgcttc
cccaccatgcccagctgggaacgcgaagaaacctgtacctggcccgcagagcccaaactg
ttcgatgatgacggcagcgtgcaagtcagcgacttggtcaacatgtttgtcagcggggtg
cccaatggtcgtgtgacggggcgctggtcgcgcgtgaggatcacggcggcacaagagcgc
aactttgccatctggtacagctactaccgcacgcgcatcaacatggccaagtcctccgtc
agcctggcctttggcacgctgaacgacaacttccgcatcggctttatgacggtggccaag
cccggctcgggcgcgcacagccacttcctgccggtgaaggatttctggggcaccgacaag
cagacctggttccagaccatccagagcgccaaaaccgggggcacctcgcccacgcgcgag
gccctggcccgcgtgggccgttactacgccggcaaaagcgacagcatcaacgacacgatg
ctgccctttgtcgaccccgtcatctccgcctgccagcgccactacaccatcgtcaccacc
gacggctactggaacactgggcaagagaccaagggcagaggcccggtgcagatcgatggc
gtgaccctggtcggccagcaagacggcccgccgctgggtctgacgccgccagagggcttg
attccgcgtcctatttacgatggttcggtcagtggtcaccggttggagcatgatgcagac
gtcagttacgggctgggcgagtgcacccttggctggagggtgactgtgcctggtgggggc
actaagactgagacgacctataagaagatcgtcaaaaaggatgtaatacgacgtagctgg
tactccgctgatctaaattggtggcaaaagaccaatacccaggtgatgcgaatctcgcat
aaggctgcatcaggtgatggcaagtatggaaagtcggaaagccagtactggcatgttcaa
ggaacgcacaggcaaaccaagaatctgtaccagcagcgtatcatctggtattacgtcaat
aaaacacagtaccgtaacaagctactgaccacatggagcacggaaacccaaacaccttgg
gcacgtgcagtggcgcggcaggtgcgtgaaaaaagatacttttattggtacaaaaatccg
gcgcttggcgaggtagagctcaagaccaccgatagagcagtctgtgaggcgtttgcgagc
ggttgtcaggtggagccagcgggaggtgatagctggaaagtggtggagtcgtgcatccct
gggtcggcgggcgactacaaggtggaatgcgaggggccgaccgaacgggagatcagtgcg
tccacctattgcagccgcaatggccagtatgtgccaggtgtgggtagcattgcctgccaa
ggtgtagccgtcccaccctacagtggaccagtgttggcgtgcaatagcctccatccacaa
cttgcggccgacattgcggccgctggtggcagctctgccatggtggagtacagcaactgc
gatcgcagccaccgcgaggagcgctatgtatctcaagatgagtgcattaacgtagctgct
acccaggccaacgggtttcgcagcactacctgcacacgcgaggctgccaacggtcctgag
ggcgaaaccgacaacagctgccaaattaccagtgcaccggtctgggacgctgccagccat
acctacaccgagtgtaggcagcggagcgcttcggaaatggtcgccatctgcgagcctggc
aatctgcctgaccagccaggccgtattaacacgctgtgcgaaggccgaggacgacccgcc
agcagcacaatagttgccccaagcgcctgtcaagccggtattgagggcgactatgcggtg
gaatgcaccaatgcgcagagcagctggagcggacctatatcccctgaaaccagaatctgc
cgcaccaattttggccacgagtacgacttgagctgtgaagagcgtcgtaccccatggcgt
gaagtgcaatcgtgcacaccagaggcccctacccctttgaatggctgggtaggcactgac
tgcaccgatgagccggtaacgccgccggggccagggttttgcaggccggcgccgggcaag
gaagggatagagcctcctgcgcctatgcccgctgatccggccgcatgccagccacaagaa
gctactcctgaaaatggatgcatatacagcacatgtcagagaaatgaatcttttgaagat
gtcgcctcatgcacgccccagagcgctagctccccgagctggatagcgacgagctgccag
cgtagacagcagggcggacgaccaaggccggattgtcaaggacccgttgagggttacaag
gcggtggcgaactgccagccgcgtagtatcgaagggtctattggctatggcacttgcgag
gcaatagtggcgagtgagcctggggcaggcagaccggttgcagaaaataattggcaaacc
acgacctgcgaaagtatcgacgagagcactcctgatggcgtcgtttacctgcaatccgaa
gccgacttcgctgcttgtaaagcgggcaaagatgagcatggcgtggaaacccagtgcgtt
caggatggaccccacaccatcgatgtaccccaaggcgagctgtgcgtgcccggctacaac
ccaaccacccacaaagtgaccgactgcagtggggtaggggttggctctacaaccattgag
ccgaccaagcctgaccactgccctccagagacctgcgaagaggccaaaggtagcaaaaaa
atcttcaacggcacttaccaaacccaccgtataacgctgaccggtacggcagaaaccggc
cgtacgttggtcaggccaccaggagaagtaccgttcaatggcgacctggaatcgcccgcg
atctgctacccgcatgaacctgcgccgcaactgccgcccgccggaaggccccagcccggc
acagccccctgggccgccctgccagccacccatacccgctgcggcagcctgccctgcaat
gaggaccacctgaacccggccaccggcggcagcagcaactcgctggccgatgtggcgcag
tactactacgccaccgatctgcgccctggcggcgagagcgatacgccacgcggctggccc
aaccaggtgcggccggtgggcacaggggccgaggacgacaaggccacctggcagcacatg
agcacctatgtgatcggcatgggggtatcgggcaccttgaagtaccacaaggactacaag
gctggcgcgggcgactttgccgatctgcgcagcggcctcaagacctggccgatctggccg
cgtgaaggggccaatgaggagagcccggaatccattgatgacttctggcacacggccgtc
aatggccggggcctgtacttcagcgccaatgacccatcggccatccagtccggcctggca
gaggtgtttgccgatatccgcgcggcgctgggctctggcggcagcgtgggcgtgacctcg
ccgatcaccgaggcgggcaacaactttgcctatgccgccacctaccgcaccggccgctgg
tcaggcgatctgcaggctttcgagattggcctgagctccggcaaacgcacacaaatcgaa
ggctggtcggccaaggatgcgctggacaggcgcgacctggccactgacaaccgacgcatt
ctcttcatgaatgggggcaggctggccgaatttacctacgccaacctgggtagcctgcgc
agccatttcgaaacgtccgccatcagcacccgcctggcccagtatgcacagatgagcgat
gcgcaaaaggaagccgcccaaggcgccaacctggtgaactacctgcgcggtgaccgcagc
ctggaagactttgcgctgggcgatgtgcgcaagctttaccgcccgcgtgaaagccgcctg
ggcgacatcattagctcgcaacccctgtacgtgggcaagcccacgcgccgctaccgcgat
gccggctatgccgcctaccgcctgagccagcaaaaccgcaggcccatggtgtatgtgggc
ggcaatgacggcatgctgcatgccttccatgccgaaaccgatctgcgcaagacagaaacc
attggcggccgaacggtacccgtggccgcgcgcgaagcctgggcctttgtgcccaccgcc
gtgatgcccgaaatggcgcgcctggccagtgtggactacgacagtgcccaccgctacttt
gtggatggctcgcccgtggtggccgatatccacgacggcagcgcctggaagaccatcctt
gtcggcggcttcaacaaggggggtaagggctactacgcgctcgacatcaccaacccgctg
caaccccagccgctgtgggaagccagcctgcccgagatgggcctgagctttggccggcct
atggtctccaaacaccccaatggcacctgggcggtgttcctcacctcgggctacaacaat
gccgacggcaagaaccatgtgtttgtgctcaatgccagcacgggggccgtcatcgagcaa
atgaccacccccagcggcagcggcctgcgtgagatcaacaactacttgcgcgaccctgcc
ggcgacaacaccacccgcttgctctacggcggcgatctggacggcaatgtctggcgtttc
caatgggatgtggccgcgagccggttccaggtgcagcgcgtggtacagctcaccgaccaa
cccatcaccacccgcatagagctggtgcaaggcagcacacaactgccgcgtattttggtc
gccaccggccgcttgttcgggtctgctgatatgacggattacagcgagcagtccatctac
ggctttgatgacaagccagaaggctatgccattagcgcagactcattccgggcagatctc
aagaaatccgagctcagggcgaccaccgatgtgaccggcaagattgtgcgtacgctgcgc
tgcacaagccgcgaccatgccgtctgcaatgaccgccgcaaaggctggtatgtcgatctg
cctgatcgaggagagcgtgtgaatgtgaacatgcagttggccggcaccaccttggtagta
gccagcaatgtgccatccgacgagccttgcctggcaggcggctatggctggctcaactac
ctcaactttgagacggggttggcggtgaatggcaacccggaaggcggccccgctggcgag
caggtacccgatacgatgatcgtcggcaatgcactgacggctaaccgggatggcaccgtg
accagccacatccagaccggtgtcgtgggaaaaccgattgatatcgtcatccccgtggcg
acccccaagccacagggtaaacgcatcagctggcgcgaggcggtgaccaactaa
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