Comamonas sediminis: ACQYWY_17555
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Entry
ACQYWY_17555 CDS
T11250
Name
(GenBank) response regulator transcription factor
KO
K07666
two-component system, OmpR family, response regulator QseB
Organism
csen Comamonas sediminis
Pathway
csen02020
Two-component system
csen02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
csen00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACQYWY_17555
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ACQYWY_17555
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
csen02022
]
ACQYWY_17555
Two-component system [BR:
csen02022
]
OmpR family
QseC-QseB (quorum sensing)
ACQYWY_17555
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
HTH_11
Motif
Other DBs
NCBI-ProteinID:
XTU99753
LinkDB
All DBs
Position
3840788..3841489
Genome browser
AA seq
233 aa
AA seq
DB search
MRILMVEDDAGIAEGLKANLQQRGHAVDWCPTLAEAWRALTAEGFDVVLLDLGLPDGDGS
RLLQQLRNAPPPTGLRKSLPDPATPVIVLTARDGVHDRIENLDLGADDYLSKPFDAEELQ
ARLRALVRRAAGRANPLIHYRDLVLDPALHQVRLRDEGVELSPRAYTILLILLQAHGRVL
SRQQLEEKLYSFDASVESNAVEVHIHHLRKKLGADYILTMRGVGYFMPQDQAS
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatactcatggtggaagacgatgccggcattgcagagggcctgaaggccaatttg
cagcagcgcggccatgcggtggactggtgcccgacactggccgaggcctggcgcgcgctg
acggccgagggctttgacgtggtgctgctggacctgggcctgcccgatggcgacggctcg
cgcctcttgcagcagctgcgcaatgcgccgccgcccacgggcctgcgcaaaagcctgccc
gatccggcgacgccggtcatcgtgctgacggcccgcgacggcgtgcacgaccgcattgaa
aacctggacctgggcgcggacgactacctctccaagcccttcgatgccgaagagctgcag
gcccggttgcgcgcgctggtccgccgcgcggcgggccgcgccaatccgctgatccactac
cgcgacctggtgctggacccagccttgcaccaggtgcggctgcgggacgaaggcgtcgag
ctctcgccccgggcctacacgatcttgctgatcctgctgcaggcccatggcagggtgctg
tcgcgccagcagcttgaagaaaagctctacagctttgatgcctcggtcgagagcaatgcg
gtggaggtgcatatccaccacctgcgcaaaaagctcggcgccgactacatcctgacgatg
cgtggcgtgggctacttcatgccccaggaccaggcatcgtga
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