Comamonas sediminis: ACQYWY_18805
Help
Entry
ACQYWY_18805 CDS
T11250
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
csen Comamonas sediminis
Brite
KEGG Orthology (KO) [BR:
csen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csen03400
]
ACQYWY_18805 (sbcD)
DNA repair and recombination proteins [BR:
csen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACQYWY_18805 (sbcD)
Archaeal homologous recombinant proteins
ACQYWY_18805 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
DUF4554
Motif
Other DBs
NCBI-ProteinID:
XTU99989
LinkDB
All DBs
Position
complement(4131136..4132374)
Genome browser
AA seq
412 aa
AA seq
DB search
MRIIHTSDWHLGQHFMGQSRQAEHSALIDWLLEQVAAQAADAVLMAGDIFDTGAPPSYAR
ALYNRLVARLHQAGVALLVLGGNHDSVAVLEESQGLLQALGTQVIAATGAAEQHVRILPL
RDGTPGCIVCALPFIRPRDVLQSQTEQSAQDKQLALQQAIQATYQQVYAAALHQQAALQA
SLGRQLPIIATGHLTTVGASSSESVREIYVGALEAFPTQAFPPVDYIALGHIHQPQTVGG
LAHIRYSGSPIALGFDEARQTKQMLLVELGAPGLQSVTALPVPVFQPMMALRSRLAALPA
ALEQATALARADKKVWLDITIEEDDYLADLPLRVQALADGLPLQLLRVKRLRGRAAAQWS
GPDAEALDALTPAQVFERRLALETMDAELQQALTTRYQSVLQSLVNPSGEPL
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcattcacacctcggactggcacctaggccagcatttcatgggccaaagccgc
caggcagagcacagtgcgctgatcgactggctgctggaacaggtggcggcgcaggccgcc
gatgcggtgctgatggcaggcgatatctttgacaccggcgcgccaccgagctacgcccgc
gcgctctacaaccgcctggtcgcgcgcctgcaccaggccggtgtcgcgctgctggtgctg
ggcggcaaccatgactcggtcgcggtgctggaagagagccagggactgctccaagcgctg
ggcacccaggtgattgccgccaccggcgctgccgagcagcatgtgcgcatcctgccgctg
cgcgatggcacccctggctgcatcgtctgcgcgctgcccttcatccgcccccgcgatgtg
ctgcaaagccagaccgagcaaagcgcgcaggacaaacagctggccttgcagcaggcgata
caggccacctaccagcaggtgtatgcggcggcactgcaccagcaggcggcgctgcaggcc
agcctggggcggcagttgcccatcatcgccaccggccacctcaccaccgtgggcgcgagc
agcagcgaatcggtgcgcgagatctatgtcggcgcgctggaggcctttccgacccaggcc
tttccgccggtggattacatcgcgctgggccatatccaccagccgcagacagtgggcggg
ctggcgcacatccgctacagcggctcgccgatcgcgctgggttttgacgaggcgcgccag
accaaacagatgctgctggtggaactgggcgcaccagggctgcagtcggtgacagccctg
cctgtgccggtgttccagcccatgatggcattgcgcagccgcctggcggccttgcccgcc
gcgctcgagcaagccactgcgctggcccgggccgacaaaaaggtgtggctggacatcacg
atcgaagaagatgactacctggccgacctgccgctgcgcgtgcaggcactcgccgacggc
ttgccgctgcagctgctgcgggtcaaaaggctgcgcggtcgggcagcagcacagtggagc
ggcccggacgccgaggcgctggatgcgctgacccctgcacaggtgttcgagcgccgcctg
gcgctggaaaccatggacgccgagctgcagcaggcgctgaccacgcgctaccagagcgtg
ctgcagtcgctggtcaaccccagcggggagccgctatga
DBGET
integrated database retrieval system
