Comamonas sediminis: ACQYWY_19330
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Entry
ACQYWY_19330 CDS
T11250
Name
(GenBank) TonB-dependent receptor family protein
KO
K02014
iron complex outermembrane recepter protein
Organism
csen Comamonas sediminis
Brite
KEGG Orthology (KO) [BR:
csen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csen02000
]
ACQYWY_19330
Transporters [BR:
csen02000
]
Other transporters
Pores ion channels [TC:
1
]
ACQYWY_19330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
XTV00091
LinkDB
All DBs
Position
4248347..4250491
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AA seq
714 aa
AA seq
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MPIHAFSFSPLRPVAGAAALLCALSAAAQTAPATPSTSEAPAAEATLPTVSVRSAVGTAD
LLQLPASANVVEGRELQDRQMQVNLSEALGSVPGLTLNNRNNYAQDLQLSVRGYGARSTF
GVRGVRLYVDGIPATMPDGQGQTSNVDISSLERVEVLRGPYSALYGNASGGVLSFYTEDP
QGPLKLETGASVGSDGQQRYSLKASGQTDGGMGYVLSTSRFMTDGYREHSAADRNLLNAK
LVIPLAHDDKLTLVANHTRGDAQDPQGLTMAQWQADPRQASSVADQYNTRKSLEQQQLGA
TYDLRINARQSLSLSAYYGHRSMLQYQSIPKAPQLAPGHAGGVIDMARDYAGARLVWVGE
FDTIVPLQLSAGLDLQQMTENRQGYENFVGNTLGVRGQLRRDEKNKVSSTDPFVQARWQL
APRWSLDTGLRYSRVRFSSDDYYITPGNGDDSGSSRQSKLLPVASLSYQLSPQQTVYASV
GRGFETPSITEMSYRNSGSGLNTDLRPTSSTQWELGYRQQLRSDALRGLWSAALFQSHSS
DEIVTDQSAGGRTTYRNAGKTRRQGVELSAQLDLVRDWQLRAAYTWLDARFREDSGSGIA
GQRLPGLARHNAYLGADWHFAPAWTVGMGVQASSNVQANDANTQAAPGYATTALSLGYRA
QIAPRWTLAAYARVNNVFDKHYVGSVIVNDGNQRYFESAMGRNWASGVNVSYQF
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgccgatccacgccttttccttctcgcccctgcgccctgtggccggggccgctgcgctg
ctgtgcgccttgtccgccgctgcacaaacggcacccgcaacaccttccacctctgaagcc
cctgctgccgaagccacgttgccgaccgtgtcggtgcgctcggctgttggcaccgcggac
ctgctgcagctgccggcctcggccaatgtggtggaaggccgcgagctgcaggatcggcag
atgcaggtcaacctgtccgaagcgctgggcagcgtacccggcctgaccctgaacaaccgc
aacaactatgcccaggacctgcagctgagcgtgcgcggctatggcgcgcgctctaccttt
ggtgtgcgcggcgtgcgcctgtatgtcgatggcataccggcgacgatgcccgatggccag
ggccagacctcgaatgtcgatatctccagcctggagcgggtggaggtgctgcgcggcccg
tattcggcgctgtacggcaatgcctcgggcggtgtgctgagcttttacaccgaagacccg
caaggccccctgaagctggaaactggcgcgagcgtaggcagcgatggccagcagcgctac
agcctgaaggccagcggccagaccgatggcggcatgggctatgtgctgagcaccagccgc
ttcatgaccgatggctaccgcgagcacagcgctgccgaccgcaacctgctcaatgccaag
ctggtgattccgctggcgcatgacgacaagctgaccctggtggccaaccacacccggggc
gatgcgcaggacccgcagggcctgaccatggcgcagtggcaggccgatccgcgccaggcc
agcagcgtggccgaccagtacaacacccgcaaatcgctggagcagcagcagctgggcgcc
acctatgacctgcgcatcaacgcccggcaaagcctgagcctgtcggcctactacggccac
cgcagcatgctgcagtaccagtccatccccaaagcgccacagctggcgccgggccacgcc
ggcggcgtgatcgacatggcgcgtgactatgccggtgcccgcctggtctgggtgggtgag
ttcgacaccatcgtgccgctgcaactgagcgcagggctggatctgcagcagatgaccgag
aaccgccagggctacgagaactttgtcggcaacaccttgggcgtgcgcggccagctgcgc
cgggatgagaaaaacaaggtcagcagcaccgacccctttgtgcaagcgcgctggcaactg
gccccccgctggagcctggacaccggcctgcgctacagccgcgtgcgcttcagctcggac
gactactacatcactcccggcaatggcgacgacagcggcagcagccgccagagcaagctg
ctgccggtcgcttcgctgtcctaccagctcagcccgcagcagacggtgtacgccagcgtg
gggcgcggctttgagacgccgagcatcaccgagatgtcctaccgcaacagcggctcgggc
ctcaacaccgatctgcggcccaccagcagcacgcagtgggagctgggctaccgccagcag
ctgcgcagtgatgcgctgcgcggcctctggagcgcggcgctgttccagtcgcacagcagt
gacgagatcgtgaccgaccaaagcgccggcggccgcaccacctaccgcaatgccggcaag
acccggcgccagggcgtggagctgtcggcccagctggaccttgtgcgcgactggcagctg
cgcgccgcctatacctggctggatgcgcgcttccgcgaggattcgggcagcggcatcgcc
ggccagcgcctgcccggcctggcacgccacaacgcctacctgggtgccgactggcacttt
gcgccggcctggacggtcggcatgggtgtgcaggccagctccaatgtgcaggccaacgat
gccaacacccaggccgcccccggctatgccaccacggccctcagcctgggctaccgcgca
cagatcgccccgcgctggaccctggccgcgtatgcgcgggtcaacaatgtgttcgacaag
cactacgtcggctcggtcatcgtcaacgacggcaaccagcgctattttgaaagcgcgatg
gggcgcaattgggccagtggcgtcaacgtcagttaccagttttaa
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