Comamonas sediminis: ACQYWY_19405
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Entry
ACQYWY_19405 CDS
T11250
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
csen Comamonas sediminis
Pathway
csen02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
csen00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ACQYWY_19405
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csen02000
]
ACQYWY_19405
Transporters [BR:
csen02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
ACQYWY_19405
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
XTV00106
LinkDB
All DBs
Position
4267932..4269554
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AA seq
540 aa
AA seq
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MSTDSDFSLATRRRFMLAAAASGLGTAVPSLAWAQDKPQKGGTLNLLLFPEPPTLTTIAH
TAGSSVTISGKVTEGLLTYDFNLNPQPQLAVAWTISPDGLVYRFQLRQGVKWHDGKPFTS
ADVVHSIGLLKEFHPRGRATFAGVAEVQAPDAHTVVLQLSRPIPYLITALAASESPIVPK
HLYASGRADTNPANNAPVGTGPFVFKEWVRGSHVIYERNPHYWDGDKPYIDRLVVRFIPD
AAARTAAIESGQVQIAPSSPVPFAEVERLRAKPGLQFETRGYEYINSVYRLEFNLESEPL
KDLRVRQAIAHALQRENLLKVAWYGQGRLTTGPVHPALKKFYVPDLPVLPYDLKRAEKLL
DDAGLTRGKAGGQWRARLNLTPIPNEGGQRTGDFLKQALGRIGIDVQINSQDFATYIKRI
YTDRAFDLHVSAMSNTFDPTVGIQRLYWSKSFQRGLPFSNGAHYASPEVDRLLESAAVEM
NEAQRIREVAEFQKHIATDLPDITLVAPDIYTIADKRVRNHTVGADGVAGNLAGVWLAAS
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgtctactgattccgatttctcgctcgccacgcgccgccgcttcatgctggccgctgcg
gcctccggcctgggcacggcagtccccagcctggcctgggcgcaggacaagccgcaaaaa
ggcggcaccttgaacctgctgctcttccccgagccgccgaccttgacgacgattgcgcac
acggcgggctcgtcggtgacgatctcgggcaaggtcaccgaggggctgctgacctatgac
ttcaacctcaacccgcagccgcagctggctgtagcctggaccatcagccccgatggcctg
gtctaccgcttccagctgcgccagggggtcaaatggcatgacggcaagcccttcacttcg
gccgatgtggtgcattcgatcggcctgcttaaagagttccacccccggggccgcgccacc
tttgccggcgtggccgaggtgcaggcccccgacgcgcacacggtggtactgcagctgagc
cgccccatcccgtacctgatcacggcactggcagcctcggagtcgccgatcgtgcccaag
cacctctatgccagcggccgggccgataccaacccggccaacaatgcgccggtgggcacg
ggccccttcgtgttcaaggaatgggtgcgcggcagccatgtgatctacgagcgcaacccg
cattactgggatggcgacaagccctatatcgaccggctggtggtgcgctttatccccgac
gccgccgcgcgcacggcggccatcgaaagcggccaggtgcagattgcacccagctcgccg
gtgccctttgccgaggtggagcgcctgcgcgccaagccgggcctgcagttcgagacccgg
ggctatgaatacatcaacagcgtctaccgcctggagttcaacctggagagcgagccgctc
aaggacctgcgcgtgcgccaggccattgcccatgcgctgcagcgcgagaacctgctcaag
gtcgcctggtacggccagggcaggctgaccaccgggccggtgcacccggcgctgaagaag
ttctatgtgcccgatctgccggtgttgccctatgacctgaagcgcgccgaaaagctgctg
gatgatgcgggcctgacgcgcggcaaggccggcggccagtggcgtgcgcggctgaacctg
acccccatccccaacgagggcggccagcgcactggcgacttcctcaagcaggcgctgggc
cgcatcggcatcgatgtgcagatcaacagccaggactttgccacctacatcaagcgcatc
tataccgaccgcgcctttgacctgcatgtgagcgcgatgagcaacacctttgacccgacg
gtgggtatccagcggctgtactggtccaagagtttccagcgcgggctgccgttctccaac
ggtgcgcattacgccagccccgaggtggaccgcctgctggaatccgccgccgtcgagatg
aacgaggcccagcgcatccgcgaggtggccgagttccagaagcacatcgccaccgacctg
cccgacatcacgctggtcgcccccgacatctacacgattgccgacaagcgcgtgcgcaac
cacaccgtgggtgcggacggcgtggccggcaacctggccggcgtctggctggccgcgtcc
tga
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