Comamonas sediminis: ACQYWY_21105
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Entry
ACQYWY_21105 CDS
T11250
Symbol
trpB
Name
(GenBank) tryptophan synthase subunit beta
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
csen Comamonas sediminis
Pathway
csen00260
Glycine, serine and threonine metabolism
csen00400
Phenylalanine, tyrosine and tryptophan biosynthesis
csen01100
Metabolic pathways
csen01110
Biosynthesis of secondary metabolites
csen01230
Biosynthesis of amino acids
Module
csen_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
csen00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
ACQYWY_21105 (trpB)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
ACQYWY_21105 (trpB)
Enzymes [BR:
csen01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
ACQYWY_21105 (trpB)
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Gene cluster
GFIT
Motif
Pfam:
PALP
Glyco_hydro_39
Motif
Other DBs
NCBI-ProteinID:
XTV00431
LinkDB
All DBs
Position
complement(4633580..4634848)
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AA seq
422 aa
AA seq
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MFEYQQPDTAGHFGPYGGSFASETLTHALVELREAYDKYQNDPEFLREFQYELAHYVGRP
SPVYHAARMSREMGGAQIYLKREDLNHTGAHKINNVIGQAMLAKRMGKPRIIAETGAGQH
GVATATICARYGLECVVYMGSEDVRRQSPNVYRMKLLGATVVPVESGSKTLKDALNEAMR
DWVANVDNTFYIIGTVAGPHPYPMMVRDFQSVIGNECLSQMPALFKEQNMAAEQPDAVIA
CVGGGSNAMGIFYPYIPYENTRLIGVEAAGEGLDSGKHSASLQRGSSGVLHGNRTYILQD
DNGQITETHSISAGLDYPGVGPEHAWLQEIGRAQYVGITDQEALDAFHYLCHTEGIIPAL
ESSHAVAYAMKLAKTMRQDQSILVSLSGRGDKDIGTVADLSGVDFYAQPSSRGVAVKGSY
TK
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaataccagcaacccgatactgcgggccatttcggcccctatggcggcagcttt
gccagcgaaaccctgacccacgccctggtcgagctgcgcgaggcctatgacaagtaccag
aacgatccggagttcctgcgcgaattccagtacgagctggcccactatgtcggccgcccc
tcgcccgtctaccacgcagcgcgcatgtcgcgcgagatgggtggcgcgcagatctacctc
aagcgcgaggacctcaaccacaccggtgcccacaagatcaacaatgtgatcggtcaggcc
atgttggccaagcgcatgggcaagccgcgcatcattgccgagaccggcgccggccagcac
ggtgtggccactgccaccatctgcgcccgctatggcctcgaatgcgtggtctacatgggc
agcgaagacgtgcgccgccaaagccccaacgtctaccgcatgaagctgctgggcgccacc
gtggtgccggtcgagtcgggcagcaagaccttgaaggacgcgctcaacgaggccatgcgc
gactgggtggcgaatgtggacaacaccttctacatcatcggcaccgtggccggcccccac
ccctacccgatgatggtgcgcgatttccagagcgtgatcggcaacgagtgcctgtcccag
atgccggcgctgttcaaggagcagaacatggccgctgagcaacccgatgcagtgattgcc
tgcgtcgggggcggcagcaatgccatgggtatcttctacccctatatcccctatgagaac
acgcgcctgatcggcgtcgaagcggctggcgaaggcctggacagcggcaagcactccgca
tcgctgcagcggggatcctccggtgtgctgcatggcaaccgcacctatatcctgcaggac
gacaacggccagatcaccgaaacccattccatcagcgccggcctggactaccccggcgtc
ggccccgagcatgcctggttgcaggaaatcggccgtgcccagtatgtcggcatcaccgac
caggaggcgctcgatgccttccactacctgtgccacaccgaaggcatcatcccggcgctg
gaatccagccacgccgtggcctatgcgatgaagctggccaagaccatgcgccaggaccag
tccatcctcgtgagcctgtcgggccggggcgacaaggacattggcacggtggccgatctc
tcgggcgtcgacttttatgcccaaccctccagccgcggcgtggccgtcaaggggagctat
accaaatga
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