Clostridium septicum: CP523_00695
Help
Entry
CP523_00695 CDS
T06069
Symbol
polC
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
csep
Clostridium septicum
Pathway
csep03030
DNA replication
csep03430
Mismatch repair
csep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CP523_00695 (polC)
03430 Mismatch repair
CP523_00695 (polC)
03440 Homologous recombination
CP523_00695 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csep03032
]
CP523_00695 (polC)
03400 DNA repair and recombination proteins [BR:
csep03400
]
CP523_00695 (polC)
Enzymes [BR:
csep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CP523_00695 (polC)
DNA replication proteins [BR:
csep03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CP523_00695 (polC)
DNA repair and recombination proteins [BR:
csep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CP523_00695 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
HHH_6
DNA_pol3_a_NII
RNase_H_2
tRNA_anti-codon
Rv2179c-like
HHH_3
DEDDh_C
Zn_Ribbon_TF
Zn_ribbon_8
YhfH
Motif
Other DBs
NCBI-ProteinID:
AYE33072
UniProt:
A0A9N7PJN1
LinkDB
All DBs
Position
complement(164259..168584)
Genome browser
AA seq
1441 aa
AA seq
DB search
MSEEVIKKIKKDINKNESLEDKDIKIIRFQFLRKSNLLKVVLRGKESLAEDEEEQVKRAV
KNNLNLDINIEILFYRDVSNISIKEIIDNHWIEVTESVIKKTPLSKVLLMKGVKEIKDSK
VIIKTGYDTILEHAESKNVPKEIAKNIENIFGITVKVYLEYDKSLEIKEDNNEKIKKEAE
VLKEIFSGRNISNEVSKAKKEPKQDKPKKTYEKREFKREPKTENNIIGRGISNEVISIAE
IDETSGIVAILGEVFKTDIVETKTGKTILTFFITDYTSSITVKCFLKPQEKDDVLDQIKK
GLYCKVRGEAIYDTYAREVVIMGRDIIKMKKSERMDGAEEKRVELHCHTTMSAMDGITSV
GKIIEKAAKWGHPAIAITDHGVVQAFPDAQIAAKKNKIKVIYGVEGYLVNDGVPIAINEK
GQNFDDTYVVFDIETTGFSAKNDRIIEIGAVKVKGKEIIDNFSVFIYPECKIPYKITELT
GITDEMVESAETIATVLPKFLEFVGDSVVVAHNASFDTGFIKKNCKDLGLEFNNTILDTV
PLCRFLYTDLKRVKLNVVAKYLGISLENHHRAVDDAKATAEIFLISLKKIIEEKEISDLK
SLNKEFLSNIDIRKENTNHIIVLAKTQEGIKNLYKLVSESHIENFFKRPRSKKSRLMEMR
DGLIIGSACEAGEVYKAVLAGKEDEEIKEIMNFYDYIEIQPVGNNSFLIEKGSVKDEDEL
RDLNKKIYYLAKECNKIVVATGDVHFLEPHDEAFRRIIMAGKGFGDADKQPPLYLKTTEE
MLKEFSYLGEEIAKEVVVKNPQLIAESVEVLKPIPDETYPPKIEGADDDIRNMTMKKVHS
IYGDPLPEVVQKRLDKELNSIISNGYAVLYLIAQKLVAKSLEDGYLVGSRGSVGSSFVAT
MSDITEVNGLPPHYVCPNCKKSEFFLDGSVSSGADLPDKVCPDCGTKYKKDGHDIPFETF
LGFEGDKEPDIDLNFSGEYQGEVHKYTEVLFGKGFVFKAGTIGTVAEKTAYGYVRKYLDE
REIRVSNAEIERLTIGCTGIKRTTGQHPGGIMVVPSDNEIYNFTPIQRPADDPTSDVTTT
HFDYHSISGRLLKLDILGHDDPTVLRMLQDLTGLDPKTIPLNDEKVISLFTSPDALGVTK
EELGCEVGSYGLPEFGTKFVRGMLVDTQPKSFADLVRISGLSHGTDVWLNNAQHFIKEGY
TTLKDCISTRDDIMIYLMYAGVPPKMAFTIMESVRKGKGLTEEFEKTMKENNVPDWYIES
CKRIKYMFPKGHAVAYVMMAVRIAYYKVYYPEAYYATYFTVRADDFDADLICKGASAVKA
RLDELYELGTKITVKDKGMITVLELSYELYVRGFKFLKVDLYESEAVKFKIEKDGIRPPI
NALQGVGENAAKSIVEARKNGEFISKEDLRLRSKVSKTVIETLTNHGCLDGMSETNQLSL
F
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
ttgagtgaagaagtcataaagaaaataaaaaaagacataaataaaaatgaatccttagaa
gataaagatattaaaattataagatttcaatttttaaggaaaagcaatttattaaaagta
gtattaagaggaaaagaatctttagctgaagatgaagaagaacaagttaaaagggctgta
aaaaataatctgaatttagatattaatatagaaattctattttatagagatgtttctaat
atttctataaaagaaataattgataatcattggatagaggttacagaaagcgtaattaaa
aaaacaccattatctaaagttttgcttatgaagggtgttaaagaaattaaagattcaaaa
gtaataataaagaccggttatgatacaatacttgaacatgcagaatctaaaaatgttcca
aaggaaatagcaaaaaatattgaaaacatatttggaattacagttaaggtttatttagaa
tatgataaatcacttgaaattaaggaagataataatgaaaagattaaaaaagaggctgaa
gtattaaaagaaatatttagtggaagaaatatttctaatgaggtatcaaaagctaaaaag
gaacctaaacaagataaacctaagaaaacttatgaaaagagagagtttaaaagggagcct
aaaacagaaaataatattataggaagaggaataagtaatgaagttatttctatagctgaa
atagatgaaacatcaggtatagtagcaattttaggagaagttttcaaaacggatattgta
gaaactaaaacaggaaaaactatcttaacattttttataactgactatacaagttctata
acagtaaaatgtttcttaaagccacaagaaaaagatgatgttttagatcaaattaaaaaa
ggtttatattgtaaggtacgaggagaagctatttatgatacctatgctagagaagttgta
ataatgggtagagacattattaaaatgaaaaaaagcgaaagaatggatggtgcagaagaa
aaaagagtagaacttcattgtcatacaactatgagtgctatggatggtataacttctgta
ggaaaaattatagaaaaagcagctaaatgggggcatcctgctatagcaataacagatcat
ggagtagttcaagcttttccagatgctcaaatagcagctaagaaaaataaaattaaagtt
atctatggagtagagggatatttagtaaatgatggagttccaatagctataaatgaaaaa
ggacaaaattttgatgatacttatgtagtttttgatatagaaacaacaggtttttcggct
aaaaatgatagaataatagaaattggagctgttaaagttaaggggaaagaaataatagat
aattttagtgtatttatatatcctgaatgtaaaataccatataaaataactgaacttact
ggtataactgatgaaatggttgaaagtgctgaaactattgcaactgtacttccaaaattt
ttagagtttgtaggagatagcgttgtagttgcgcataatgcttcttttgatacaggtttt
ataaaaaagaattgtaaggatttagggttagaatttaataatacaattttagatactgta
ccattatgtagatttttatatacagacttaaaaagggttaagcttaatgtggttgcaaaa
tatcttggaatatcacttgaaaatcatcatagagctgtagatgatgcaaaggcaacagcc
gaaatttttctaatatctttaaaaaaaattatcgaagaaaaagagataagtgatttaaaa
agtttaaataaagaatttttaagtaacatagatataagaaaagaaaatactaatcatata
attgtattagccaaaacacaagaaggaataaaaaacctatataaattagtttcagaatct
catattgagaatttctttaaaagacctagaagtaaaaaaagtcgtcttatggaaatgagg
gatgggcttattataggatcagcttgtgaagcaggggaggtatataaagctgttttagca
ggaaaagaagatgaagaaataaaagaaataatgaacttttatgattacatagaaattcaa
cctgtaggtaataatagctttttaatagaaaaggggtcagttaaagatgaagacgaactt
agggatttaaataaaaaaatatattatttggctaaagaatgtaataagattgtcgttgct
acaggagatgttcattttctagaacctcatgatgaagcttttagaagaataataatggca
ggtaagggttttggtgatgctgataagcagccaccattatatttaaaaactacagaggaa
atgttaaaagaattttcttatcttggagaggaaatagcaaaagaggtagttgttaaaaat
ccacaattaattgctgaatctgtagaggttttaaaaccaattcctgatgaaacttatcca
cctaaaattgaaggtgcagatgatgatataagaaatatgactatgaaaaaggttcattca
atttatggagatcctcttccagaagtagttcaaaaaagacttgataaagaattaaattct
attataagtaatggatatgcagttttatatcttatagcacaaaaattagttgctaaatcc
ctagaagatggatatttagttggatcaagaggttcagttggatcatcttttgtagctact
atgtcagatattactgaggttaatggacttcctccacattatgtttgtccaaattgtaaa
aaatctgagttctttttagatggatctgtaagctctggagcagatttgccagacaaagtt
tgtccagattgtggaactaaatataaaaaagatggtcatgatataccatttgaaaccttt
cttggttttgaaggagataaagaacctgatatcgatcttaacttttcaggtgaatatcaa
ggggaagtacacaaatatacagaagtattatttggtaaaggattcgtatttaaagcaggt
acaataggtacagttgctgaaaaaacggcatacggatatgttagaaaatatttggatgaa
agagaaattagagtgtctaatgcagaaattgaaaggttaactattggatgtactggaata
aaaagaactacaggacaacatcctggaggaataatggttgttccaagtgataatgaaata
tataatttcactccaatacagcgtccagcagatgatcctacatcagatgtaactactaca
cattttgattaccattcaatatcaggtagacttttaaagttagatatactaggtcacgac
gatcctacagtacttagaatgcttcaagatttaacaggactagatcctaagaccatacca
ttaaatgatgaaaaggtaatttcattatttacatctccagatgcattaggagtaactaaa
gaggagcttgggtgtgaagttggtagttatggtcttccggagtttgggactaaatttgtt
agaggaatgcttgtagatacacaacctaaaagttttgcagatttagttagaatatctggt
ttatctcatggtacagatgtatggttaaataatgcacaacattttataaaggaaggttac
acaacacttaaagattgcatatcaacaagagatgatattatgatttatttaatgtatgct
ggagtaccacctaaaatggcatttacaattatggaaagtgtaagaaaaggaaagggtctt
acagaggaatttgaaaaaacaatgaaagaaaataatgttccagattggtatatagagtct
tgtaagagaataaaatacatgttccctaaggggcatgctgttgcatatgttatgatggca
gttagaatagcatattataaagtttattatccagaagcctattatgcaacgtattttact
gtaagagctgatgattttgatgcagacctaatatgtaagggtgcatcagcagttaaagca
agactagatgaattatatgaacttggaacaaagataacagttaaagataaaggtatgatt
acagttctagaattatcatatgagctttatgtaagaggttttaaatttttaaaagtagat
ttatatgaatcagaagcagtaaagtttaaaatcgaaaaagatggaataagaccacctata
aatgcacttcaaggtgttggagaaaatgcagcaaagagtatagtagaagcaagaaaaaat
ggagaatttatttcaaaagaggatttaagattaagatctaaagtttcgaaaactgttata
gaaactttaactaatcatggatgtttagatggaatgtcagaaactaatcaattatcatta
ttctaa
DBGET
integrated database retrieval system
