Clostridium septicum: CP523_02820
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Entry
CP523_02820 CDS
T06069
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
csep
Clostridium septicum
Pathway
csep03410
Base excision repair
csep03430
Mismatch repair
csep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CP523_02820 (recJ)
03430 Mismatch repair
CP523_02820 (recJ)
03440 Homologous recombination
CP523_02820 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csep03400
]
CP523_02820 (recJ)
DNA repair and recombination proteins [BR:
csep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CP523_02820 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CP523_02820 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CP523_02820 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AYE33472
UniProt:
A0A9N7JKD4
LinkDB
All DBs
Position
complement(626062..627837)
Genome browser
AA seq
591 aa
AA seq
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MKEKWILTNKKESFLKLRNNINENPLVLRILANRGISEAEIANKFLKVNLSDLYNGFLMK
DMEKGIGIIKEAIEKNKKIIIYGDYDCDGVVSTVVLYKTLKKCGANFSYHIPNREEEGYG
MNSDRIKKLNEEGYEVILTCDNGISAFEEVKLAKELGMEVVITDHHDIPLKKLGDEEMIQ
MIPMADAVINPKRPECKYPFKSLCGAGVALKFAQCLYEKLKIDNREYEKLIEYVSISTVC
DVVDLLDENRVIVKKGLEMLNSTNNMGIQELKKVVELEDKQINEYHLGFVIGPCINATGR
LETADLSVELLITEDRNRAKELAKELYNLNSRRQELTKESSERVIEKVEKEKLPSEKVIV
VYDENIHESIAGIVAGRVKERFNLPCIVITKGKEMPKGSARSIEGYNMFEELSNCKELLS
KFGGHPMAAGLSLEEENIEKLRKKLNNNCKLTNEDIIPIVRIDSPLPLEYLDEELVELIE
GLRPFGKGNPSPLFAVKNVNVNRMWLMGKDKNFLKLRCEIQGKNLNIDGISFDKFIDFKE
EYTKKFGEAEFLKACASSYINIKMDIIYYPNINEFNGKKNIQLMIKNLRIV
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaaaatggatattaactaataaaaaagaaagttttttaaagttacgtaataat
attaatgaaaatccactagttttaagaatattagccaatagaggaatctcagaagctgaa
atagcaaataagtttttaaaagttaacttgtcagatttatataatggatttttaatgaag
gacatggaaaaaggaataggaataataaaagaagcaatagaaaaaaataaaaagataatt
atttatggtgattacgattgtgatggtgttgtaagtacagttgttctttataaaacttta
aagaaatgtggtgccaactttagctatcatattccaaatagagaagaagagggatatggt
atgaatagtgacagaataaaaaagttaaatgaagaaggatacgaggtaattttaacttgt
gataatgggatatctgcatttgaagaagttaaattagctaaagaacttggaatggaagtt
gttataacagatcatcatgatatacctttgaaaaagcttggtgatgaagaaatgattcaa
atgattcccatggcagatgcagttattaatcctaaaagacctgaatgtaaatatcctttt
aaaagtttatgtggagcaggcgttgctttaaaatttgcacaatgcttatatgaaaaactt
aaaatagataatagagaatatgaaaagttaatagaatatgtgtcaatatcaacggtatgt
gatgttgttgacttgttagatgaaaatagagttattgttaaaaaagggttagagatgttg
aattctaccaataatatggggatccaggaactaaagaaagttgtagagttagaagataaa
caaattaatgagtatcatttgggatttgttataggaccatgtataaatgcaactggtaga
cttgaaacagcagatctttcggtggaacttttgataacagaagacagaaatagagctaag
gagttagccaaagaattatataatttaaattctaggagacaagaacttactaaagaaagt
tcggaaagagttatagaaaaagtagaaaaggaaaagctgcctagtgaaaaggtaattgta
gtttatgatgaaaatatacatgaaagtatagctggaatagtagcaggaagagtaaaagaa
agatttaatttaccatgtatagtaatcacaaaaggaaaagaaatgccaaagggatcagcc
cgttctattgagggttacaatatgtttgaagaattatcaaactgtaaagaattattaagt
aaatttggaggtcatccaatggcagctggattatctttggaagaagaaaatatagaaaag
ttaagaaaaaaattaaataataattgtaaacttaccaatgaggatattattcctatagtt
aggatagattcaccattacctttagaatatttagatgaagaattagtggaacttatcgaa
ggattaagaccatttggaaaaggaaatccaagtccattgtttgcagttaaaaatgtaaat
gtaaatagaatgtggttaatggggaaggataaaaactttcttaaattaagatgtgaaatt
cagggtaagaatctaaatatagatggaataagctttgataaatttatagattttaaagaa
gaatatacaaaaaaatttggagaggcagagtttttaaaagcttgtgctagtagctatatt
aatataaaaatggatataatatattatccaaatataaacgagtttaatggtaaaaaaaat
attcaattaatgattaaaaatttaagaatagtttaa
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