Clostridium septicum: CP523_03350
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Entry
CP523_03350 CDS
T06069
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
csep
Clostridium septicum
Pathway
csep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CP523_03350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csep03019
]
CP523_03350
03009 Ribosome biogenesis [BR:
csep03009
]
CP523_03350
Enzymes [BR:
csep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CP523_03350
Messenger RNA biogenesis [BR:
csep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CP523_03350
Ribosome biogenesis [BR:
csep03009
]
Prokaryotic type
rRNA helicases
CP523_03350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AYE33571
UniProt:
A0A9N7PKI1
LinkDB
All DBs
Position
complement(744265..745710)
Genome browser
AA seq
481 aa
AA seq
DB search
MNNKTFKNMGLSEEILKALNNLGFSNPSEVQKEAIPNMLNKEDIIVKSQTGSGKTASFGI
PLCEMAIVEETKVQGLILVPTRELAIQVKDDISNIGRLKKVRCAAVFGKQPFNEQIRELK
QRVHIVAGTPGRINDHINRGNLNLEHIKYVVIDEADKMLNMGFIDQIGEILDRLPKERNT
ALFSATLPEEIENLCSKYMKNPKSLTVQSKVFNREKIKESYINIDSNNKDEELCRCLYAH
APEAAIVFCNTKDKVKSLYNELKRDGIKVEQLHGDMEQKDRLNTMERFKNKEFKILVATD
IAARGIHVDHITHVFNYEIPMERESYVHRIGRTGRAGKEGFAISFVSNYENKLLEGIEEY
IGYKIPMGNLPSQEKVIEGRKVFRESQKELSKNIGNNKKSIHKDVTKLHLTAGKKKKIRP
IDIVGCLSNLKELTGEDIGIIDVQDICSFVDILNGKGNEIIKKYKEVSIKGKNVKISKAK
K
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaataataaaacatttaaaaatatgggattaagtgaagagatacttaaagctttaaat
aacttaggatttagcaatccatcagaagttcaaaaagaagctatacctaatatgttaaat
aaagaagacataatagtaaaatcacaaaccggtagtggaaagacagcaagttttggtata
ccattatgtgaaatggcaatagttgaagaaacaaaagttcaaggactaattttagtacca
acaagagagttagcaattcaagtaaaggatgatatatccaatataggaagacttaaaaaa
gttagatgcgcagcagtatttggcaaacagccttttaatgaacaaattagagagcttaaa
caaagagtacatatagtagcaggaactcctggaagaataaatgatcatataaataggggg
aatttaaacttagagcatattaaatatgtagttatagatgaagcagataaaatgcttaat
atgggatttatagatcaaataggtgaaatattagatagattgcctaaagaaagaaatact
gcattattttcagctactttacctgaggaaatagaaaatctatgttcaaagtatatgaaa
aatcctaaaagtctaactgtacaatctaaggtttttaatagagaaaaaataaaagaaagt
tacataaacatagattctaataataaagatgaagaattatgtagatgtttgtatgcacat
gctccagaagctgcaatagttttttgtaatacaaaagataaggttaaaagtctttataat
gaattaaagagagatggtataaaagtagaacaacttcatggtgatatggagcaaaaagac
agattaaatactatggaaagatttaaaaataaagaatttaaaatattggtagctacagat
attgcggctagaggaatacatgtagatcatataactcatgtatttaattatgaaattcct
atggaaagagaaagttatgtacatagaataggaagaacaggacgagctggaaaagaggga
tttgctatatcatttgtttctaattatgaaaataaattattagaaggaatagaggaatat
ataggttataaaattccaatggggaatttaccatcgcaagaaaaagttatagaaggaaga
aaagtatttagagaaagtcaaaaagaattaagcaaaaacataggaaataataaaaaatct
atacataaggatgtaactaaacttcatctaacagcaggtaaaaagaagaaaattcgtcca
atagatatagtaggatgtctaagtaacttaaaggaactaacaggtgaagatataggaatt
atagatgttcaggatatatgttcatttgttgatattttaaatggaaaagggaatgaaatt
attaaaaagtataaagaagtatctataaaaggcaagaatgtaaaaattagtaaagctaaa
aagtaa
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