Clostridium septicum: CP523_06340
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Entry
CP523_06340 CDS
T06069
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
csep
Clostridium septicum
Pathway
csep03030
DNA replication
csep03430
Mismatch repair
csep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CP523_06340
03430 Mismatch repair
CP523_06340
03440 Homologous recombination
CP523_06340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csep03032
]
CP523_06340
03400 DNA repair and recombination proteins [BR:
csep03400
]
CP523_06340
Enzymes [BR:
csep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CP523_06340
DNA replication proteins [BR:
csep03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CP523_06340
DNA repair and recombination proteins [BR:
csep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CP523_06340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AYE34115
UniProt:
A0A9N7JLF9
LinkDB
All DBs
Position
complement(1445837..1449397)
Genome browser
AA seq
1186 aa
AA seq
DB search
MEKNFTHLHLHSEYSLLDSSGKIKKIISKAKELGMDSIAITDHGVMYGCVAFYKEAREQG
IKPILGCEVYVAAKSMDIKINDKENSTHHLVLLVKNEKGYENLMEIVSEASIRGFYYKPR
VDHEFLRNHSEGLIALSACLGGEVQSWHLKDNYEKAKEVALLYKDIFKEGFYLEIQNHGM
EEQKKVMEENIRLAKELDIPLVATNDVHYINKEDSEAHDILMCIQTGKTVDDPNRRKYPS
NQFYLKSKEEMWDMFSHVKEALENTTKIAEECNFDYEFHVSKLPKFPVPEDREPYEYLRE
TCYLGLIERYDVFKHFLNKPLNVEEIVDFSKNNEEACGYIERLEYELSVIHQMGYVDYFL
ITWDFIKYSNDNGIPTGPGRGSAAGSIVAFTLGITKIDPIKYSLLFERFLNPERVSMPDI
DSDFCYERRQEVIDYVVGKYGVNNVSQIITFGTMAPRACIRDVGRAMNYAYSEVDRIAKM
IPTMIGITIEKALELNPELKEAYNNEERVKTLIDVSKKLEGLPRHSSTHAAGVVIASKPL
VEYVPLQKNDESIVAQFDMTTLEELGLLKMDFLGLRTLTVMSDAVKMIKYNRGIDIDLDK
IDFEDKEVYKMLGEGKTAGVFQLESAGMTSFMKELKPDSLEDIIAGISLYRPGPMAEIPK
YVECKKNPEKVQYEVPQLEEILNVTYGVMVYQEQVMEIVRKLAGYSMGRSDLVRRAMSKK
KHKVMEEERKNFIYGITDENGNLEVPGCLRNGISEESANKIFDSMMDFASYAFNKSHAAA
YAVIGYQTAYLMKYYPVETIAAMLNSVMGTSEKVAHYINFAESLGIQVLPPNINESYSKF
TVKGDKIRFGLAAIRNVGLNVVENVVYSRDKKGNFESLVDFINKIDLSAINKRAVESLIK
AGAFDEFKIFRSKLLAVYEKIMDSVSNEKKRNIDGQMSLFGLSEETLKSPEINYPNIKEF
AKKHMLAMEKEMTGLYLSGHPLDEYFQSLKMQTSTSIEKIFKSYEIMQETYNNEEIIEDI
IHDEERVILGGIISEVNQKITRNNTMMAFLKLEDLSGMIEVIVFPKTLDKVRELIKPDSL
VAIKGRVSIKEDELPKLICESINPLEKVNSEKIYIRTENINTGKELIKTLKEMMPKEYKG
DTAVFIFTSNDRKKYRMSRNLWINMESDATDYLRKLIGEENVKIIE
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaattttacccatcttcatctccattcagagtatagtttattagatagttca
ggaaaaataaaaaagataataagtaaggctaaagagctagggatggatagtatagccata
acagatcatggagttatgtatgggtgtgttgctttttataaagaagcaagggaacaagga
ataaaacctatattaggatgtgaagtttatgttgcagctaagtcaatggatattaaaatc
aatgacaaggaaaatagtacacatcacctagttcttttagtaaaaaatgaaaaaggatac
gaaaaccttatggagatagtatctgaagcttcaattagagggttttactataaacctagg
gtagatcatgagtttttaagaaatcatagtgagggattaattgctttaagtgcatgttta
ggtggagaagttcaatcatggcacttaaaagacaattacgagaaggcaaaggaagtagct
cttttatataaagatatatttaaagagggattttatttagaaattcaaaatcatggtatg
gaagagcaaaaaaaggttatggaggaaaatataagattagcaaaagaacttgatattcct
cttgtagccactaatgatgttcattacataaataaagaagattcagaagctcatgatata
ttaatgtgtattcaaactggaaaaacagtagatgatccaaatagaagaaagtatccatca
aatcagttttacttaaagtctaaagaggaaatgtgggatatgttctctcacgttaaggag
gcacttgaaaatacaactaaaattgcagaagagtgtaattttgattatgaatttcatgtt
tcaaagcttcctaagtttccagtaccagaagacagggaaccttatgaatatttaagagaa
acttgttacttaggtcttattgaaaggtatgatgtatttaagcatttcttaaataaacca
ctgaatgttgaagaaattgtggatttttctaaaaataatgaggaagcttgtggatatatt
gaaagattagagtatgaactatcagtaatacatcaaatggggtatgtagattatttttta
attacatgggattttataaagtattcaaacgataatggaattccaacaggaccaggaaga
ggatcagcagcaggctcaattgtagcatttactttaggaataacaaagatagatcctata
aaatatagtttactttttgaacgttttttaaatccagaaagagtaagtatgccagatata
gattcagatttctgttatgagagaagacaggaagttatagattatgttgtaggaaaatat
ggagtaaacaatgtatctcaaataataacctttggaactatggcaccaagggcttgcata
agagatgtaggtagagccatgaactatgcatattcagaagttgatagaatagctaaaatg
attcctactatgataggaataactatagaaaaggcacttgagttaaatccagaattaaaa
gaagcttataataatgaagaaagagttaaaactttaatagatgtaagtaaaaagttagaa
ggattgcctagacattcatcaacccatgctgcaggagttgttatagcatctaaaccacta
gtagagtatgttccactacaaaaaaatgatgaatcaatagtagctcaatttgatatgaca
acattagaagaacttggattactaaaaatggactttttagggttaaggactttaacagta
atgagtgatgctgttaaaatgataaagtataatagaggaatagatatagacctagataaa
atagattttgaagataaagaagtttataaaatgttaggtgaaggcaaaacggcaggagta
ttccaattagaatcagcaggaatgacttcatttatgaaggaactaaagccagattcttta
gaagatataatagccggtatatcattatatagaccaggtcctatggcagaaataccaaaa
tatgtagagtgcaaaaaaaatccagaaaaggttcaatatgaagttccacagttagaagag
atattaaatgttacttatggagtaatggtttatcaagaacaggtaatggagattgttaga
aaacttgcaggttattctatgggaagaagtgaccttgtaagaagagcaatgtcaaagaaa
aagcataaagttatggaagaagaaagaaagaactttatttatggaattactgatgaaaat
gggaatttagaagttcctggatgtttaagaaacggtatatcagaagaatctgcaaataaa
atttttgattctatgatggattttgctagttatgcatttaataagagtcatgcggcggct
tatgcagtaataggataccaaacagcttatttgatgaagtattatcctgtagaaacaata
gctgcaatgcttaattcagtaatgggaacaagcgaaaaagtagctcattatataaatttt
gcagagagtttaggaattcaggtacttcctcctaatataaatgaaagttattctaaattt
accgttaaaggggataagataagattcggattagcagctataagaaatgtaggtttaaat
gttgttgaaaatgttgtctattcaagagataaaaaaggaaattttgagtcactagttgat
tttataaataaaatagatttatcagcaataaataaaagggctgtagaaagcttaattaaa
gctggagcatttgatgaatttaaaatatttagatcaaagctgttagcagtttatgaaaaa
ataatggatagtgtttcaaatgaaaaaaagagaaatattgatggacaaatgagtttattt
ggattatcagaagaaacattaaaatcaccagaaataaattatccaaatataaaagaattt
gcaaaaaagcatatgctagcaatggaaaaagaaatgacaggtctttatttatcaggtcat
ccattagatgaatattttcaaagtttaaaaatgcaaacaagtacaagtatagaaaaaata
tttaaatcttatgaaataatgcaagaaacctataataatgaagaaattatagaagatatt
attcatgatgaagaaagagtaattcttggtggtattatctcagaagtaaatcaaaaaatt
actagaaataatactatgatggcatttttaaaattagaagatttatctggaatgattgaa
gtaatagtatttcctaagactttagataaagtaagagaattaataaaaccagatagttta
gtggcaattaagggaagagtaagcataaaagaagatgaacttccaaagcttatatgtgaa
tcaataaatcctttagaaaaagtaaattcagaaaaaatttatataaggactgagaatatt
aatacagggaaagaattaataaaaacattaaaagaaatgatgcccaaagaatataaaggt
gatactgctgtatttatttttacgtctaatgatagaaaaaagtatagaatgtctagaaat
ttatggattaatatggaatccgatgcaactgattatttaaggaaattaattggtgaagaa
aacgtaaaaataatagaataa
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