Entry |
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Name |
(GenBank) ATP-dependent DNA helicase
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KO |
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Organism |
csep Clostridium septicum
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:csep00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CP523_06565
09124 Replication and repair
03420 Nucleotide excision repair
CP523_06565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:csep03021]
CP523_06565
03036 Chromosome and associated proteins [BR:csep03036]
CP523_06565
03400 DNA repair and recombination proteins [BR:csep03400]
CP523_06565
Enzymes [BR:csep01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
CP523_06565
Transcription machinery [BR:csep03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CP523_06565
Chromosome and associated proteins [BR:csep03036]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
CP523_06565
DNA repair and recombination proteins [BR:csep03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CP523_06565
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
complement(1499209..1501503)
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AA seq |
764 aa
MEDKIVIRESVRGIIEYILRKGHLDDRYTGKSRALEGTLAHQKLQLSNEKIYSNYKKEVR
LEYTFNIEDALLKVEGRADGIIIEDNKVIIEEIKSTMKNLTFIDEDYNELHWAQAKFYSY
IYLMQNNLSKISIRLSYYNIETNEVKSFDKKFILEELIEFVDYIVNEYSRWIKIKGNLQL
ERDKSIYKLDFPFQFYRKGQRELAVNCYNTIKEKGVLYAQAPTGIGKTMSTIFPAVKALG
NGMGSRIIYLTAKTITRTVAEEAFNKLKGKGLNFRSITLTSKEKICFQEKVSCNPDECKY
AVNYFSKVNDIIYEMLSNENKFTRDVVERYARKYDICPFELSLDLSSWCDGVICDYNYAF
DPRVRLKRFFEDDIKNNIILVDEGHNLVDRAREMFSAELYKSRILEVSKLIKGTSPKFYK
ALSSVNKEFIKIRKQVQELEENSMYQKEEFRDLYKLLRIVLKEGDEYLITSIGTANYNEV
LDLYFDIRSFVSISELYSNEYVTIVELDKSEVKVKLFCVNPSKNLSMIVRQSYSTIIFSA
TLTPLTYYIDLLGGNEDSYRMKLPSPFDSEKFKTYAYPLNMRYSMREKNIDNVCRLIRDF
INKIQGNYMAFLPSYSYLNKVYNRYVELYGEEGTVCQGDTLSEEDREKFINNFREKNKII
AFCVVGGIFSEGIDLPGDMLIGSIVVGVGFPKISKEGDIIKDYYEENGFDYAYVYPGINK
VLQAAGRVIRTEEDEGSLLLIDDRYFTNKYRALLPSEWDVKKIN |
NT seq |
2295 nt +upstreamnt +downstreamnt
atggaagataagatagtaattagggaatcggttagaggaataatagaatatatattaaga
aaaggacacttagatgatagatatacaggaaaaagtagagctttagaaggaacattagcc
catcaaaaattacagttaagtaatgaaaagatatattcaaattataaaaaggaagtaagg
ctagaatatacttttaatatagaagatgctttattaaaagtagaaggtagagcagatgga
ataataatagaagataataaagttataatagaagaaattaaatcaacaatgaaaaattta
acttttatagatgaagattataatgaattacattgggcacaagctaagttttattcatat
atatatttaatgcaaaataatttaagtaaaatatcaataaggcttagttattataatata
gagacaaatgaagttaagagttttgataagaaatttattttagaggagctaatagagttt
gtagattatattgtaaacgaatatagtagatggattaaaattaaaggtaaccttcaatta
gaacgagataaatctatttataagttagactttccatttcagttttatagaaaaggtcaa
agggaattagcggttaactgctataatactataaaagaaaaaggtgttctttatgcacaa
gcaccaactggaatagggaagactatgtcaacgatatttcctgctgtaaaagctctagga
aatgggatgggaagtaggataatatatttaacagcaaagacaattacaaggactgtagca
gaagaagcttttaataaattaaaaggcaagggtttaaactttagaagtataactttaact
tcaaaggagaaaatttgtttccaagaaaaagtatcatgtaatcctgatgaatgtaaatat
gcagttaattattttagcaaagtaaatgatattatatatgagatgctttcaaatgaaaat
aaatttacaagggatgtagtagaaaggtatgcaagaaaatacgatatttgtccttttgaa
ttatcgttagatttaagttcttggtgtgatggagtaatttgtgattataattatgccttt
gatccaagagtacgattaaaaagatttttcgaagatgatattaagaataatattatatta
gttgatgaaggtcataacttagttgatagagctagagaaatgtttagtgctgaattatat
aaaagtaggattttggaagtaagtaaattaataaagggtacttctcctaagttctataag
gctttgtcttctgtaaataaggaatttataaagataagaaagcaagtacaagagttagaa
gaaaatagtatgtatcaaaaagaagagtttagagatttatataaacttttaagaatagtt
ttaaaggaaggtgacgaatatctaattacatctataggtacagctaattataatgaagta
ttagatttatattttgatattagaagctttgtttctatttcagaactatattcaaatgag
tatgttacaatagttgaattagataagagtgaagttaaggtaaaattattttgtgtaaat
ccttctaaaaacttatctatgatagtaagacaaagctattctacaataatattttcagca
actttaacgccattaacttattatatagacttgcttggtggaaatgaagatagttataga
atgaagttaccatcaccttttgattctgaaaaatttaaaacttatgcatatccattaaat
atgagatatagtatgagagaaaagaatatagataatgtctgtagacttattagagatttt
attaataaaatacagggtaattatatggcttttttaccatcatactcatatttaaataaa
gtatataatagatatgtagagctttatggagaggaaggtacagtttgtcagggggatacc
ttatcggaagaagatagagagaaatttattaataactttagagaaaagaataaaataata
gcattttgtgttgtaggtggaatattttcagaaggaattgacttgccaggagatatgctt
ataggaagtatagtagttggtgtaggttttcctaaaatatctaaagaaggagatataata
aaggattactatgaagaaaacgggtttgattatgcctatgtttatccagggataaataag
gtgctccaagcagcaggtagagtaattagaacagaagaggatgaaggtagtcttttatta
atagatgataggtattttacaaataaatatagagctttattaccaagtgaatgggatgtt
aaaaagataaattag |