Clostridium septicum: CP523_07865
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Entry
CP523_07865 CDS
T06069
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
csep
Clostridium septicum
Brite
KEGG Orthology (KO) [BR:
csep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csep03400
]
CP523_07865 (addB)
Enzymes [BR:
csep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CP523_07865 (addB)
DNA repair and recombination proteins [BR:
csep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CP523_07865 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AYE34347
UniProt:
A0A9N7PKQ9
LinkDB
All DBs
Position
1772028..1775471
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AA seq
1147 aa
AA seq
DB search
MGIRFIFGRAGTGKSRFCLEQIKKKIENGSNRKLILLVPEQYTFQSEKNLLDMVGESGLL
TAEVLSFKRMAYIVFDECGGRTNIRMKDSGKNMLIHKILKDNGEDLEYFNRMSKQQGFTG
IVSKTITEFKKYNISPEMLELKEADIEDEELKKKIKDLRLLFNDFNKILHEKYIDSEDEL
TFLAEKLNSCDIYNDAEIWLDEFTTFTPQQLEVIKRLAKKAKTINITLCCDSLNNGSKTD
ETDIFDAIKSTENKILKMMEENNIGYVEPINLNKGYSHRFINSKELQHIEKHFFTYPFKE
YKNKVNDVRIYKANNSYDEVETVAKDILRLVRDNGYRFKDIAVVCREIDNYEKITSVIFN
EYNIPYFLDKKRDVLNNPLIVLIISSLEILSSNWSYESVFKYLKSGLITIDSNYIDILEN
YVLANGIKGYKWTGELITKENDELTEEDILITEVMEEVRRPLINLYNKIKGEKKVIEICT
ALYEFLVELDVFKVMELWLEEFDNNGLQDRIKEYNQVPAIVMDILDQAVEVLGDEVTDIK
GFAKILISGFEEQEIGVIPISLDQVNIGDIARIKGRDVKALYVVGVNDGILPSANKEEGI
ILDRERILLREIGVELASDTKTRAFEEQFMVYTALTIPSKYLMVIYPMADFEGKSLRPSI
IIPRLKRLFPNLEEESDIYNKSLKEDRLNKITAPIPTFNELISALRMEFDSEEVEDYWAQ
TFKWFEGNEEFKDKINRMFKGLNYSNLVENMSKEKIRKLYATDTGKLKFSVSRIEKYAQC
PFGYYVQYGLKAKNRKVYEFTAPDLGSFMHDILDAFTNKVKDEKIAWSDLDKGKCGDIVG
ELISIKLAEDSNSILNSNKRYMYFADRFRRTITKSVMVIAEQMKRGEFEVFKNEFSFGSF
KDGEPIKIDLHSNETVYLVGRIDRIDTLNMDGNTYIRIVDYKSGAKKFDLNELYYGLQIQ
LLVYLDALIKNSQYLLDKQVIPGAILYFRIDDPIIKSKKELSEDEIQKQVLEKLKMNGLL
LKDAKLVRAMDKNMETYSLVIPATFKKDGDFTSKSSVVTEEQFKLLREYVNKKMVDICEE
MLSGTIKIEPCKYNQTTYCTYCDYSSICQFDTGIQDNKYKIILKKDNDEIWQSMKDTVEG
IEKEGEK
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgggaataagatttatttttgggagagcaggaactggaaaaagtagattttgtttagaa
caaataaaaaagaaaatagaaaatgggagtaatagaaagttaattttattagttccagag
caatatacttttcaaagtgaaaaaaaccttttagatatggtaggtgaatcgggactgcta
acagcagaggttctaagttttaaaagaatggcttatatagtatttgatgaatgcggtgga
agaactaatataagaatgaaagattcagggaaaaatatgttaatacataagattcttaaa
gacaatggagaagatcttgaatatttcaatagaatgtctaaacaacagggatttacagga
atagtttctaagacaataactgaatttaaaaaatataatatttccccggaaatgttggaa
ttaaaagaagctgatattgaagatgaagagttaaaaaagaagataaaagatttaagatta
ttatttaatgattttaataaaatattacatgagaaatatatagattcagaagatgaactt
acctttcttgcagaaaaattaaatagttgtgatatatataatgatgctgaaatatggcta
gatgaatttactacatttacgccacagcaattagaagttataaagagattagctaagaaa
gctaaaactataaatataacattatgttgtgatagcttaaataatggaagtaaaactgat
gaaactgatatatttgatgcaataaaaagcactgaaaataaaatattaaagatgatggaa
gaaaataatataggatatgtagagcctataaatttaaataagggatattcacatagattt
attaatagtaaagaacttcaacatatagaaaaacattttttcacttatccgtttaaagaa
tataaaaataaagtaaatgatgtaagaatatataaagctaataatagttatgatgaagta
gaaacagtagcaaaagatatattacgtctagtaagagataatggatatagatttaaggac
atagcagtagtatgtagagaaatagataattatgaaaaaattacttctgtaatatttaat
gagtataatattccatattttttagataaaaagagggatgttttaaataatcctttaata
gttcttataatatcatcattagaaatattatctagcaactggtcttatgagagtgttttt
aagtatttaaaaagtggacttataactattgattctaattatatagatatattagaaaac
tatgtattggctaatggaattaaaggatataagtggactggagagttaattactaaagaa
aatgatgaattaactgaagaagatatattaataacagaagtaatggaagaagtgagaaga
cctttaataaatttatataataaaataaagggtgagaaaaaggtaatagaaatttgtact
gcattgtatgaattcttagttgaactagatgtgtttaaagttatggaactatggttagaa
gaatttgataataatggtttgcaagatagaataaaagaatataatcaagttccagctata
gttatggatatattagatcaggctgtagaagttcttggtgatgaggttactgatattaag
ggtttcgctaaaatattaatatcaggatttgaagagcaagaaataggggttattcctatt
tctttagatcaggttaatataggtgatattgctagaataaaaggaagagatgttaaagct
ttatatgtagttggtgtaaatgatggcattttaccttctgcaaataaagaggaagggatt
atattagatagagaaagaatactacttagagagataggagtagaattagcatctgatact
aaaactagagcctttgaagaacaatttatggtttatacggcgttaacaattccatcaaaa
tatttaatggttatctatcctatggcagattttgaagggaaatcattaaggccatcaata
ataattccaagacttaaaaggctttttccaaacttagaagaagaaagtgatatatataat
aagagtttaaaagaagatagattaaataaaataactgcacctataccaacttttaatgag
ttaatatctgcattaagaatggaatttgatagtgaagaggttgaggattattgggcacaa
acatttaagtggtttgaagggaatgaagagtttaaagataagattaatagaatgtttaaa
ggattaaattattctaatttagttgaaaatatgtcaaaggagaaaataagaaaattatat
gctacagatactggaaagcttaaatttagtgtgtctagaatagaaaaatatgcacagtgt
ccttttggatattatgttcaatacggattaaaggctaagaatagaaaagtatatgagttt
acagcaccagatttaggttcttttatgcatgatatattagatgcttttactaataaggtt
aaggatgaaaagattgcttggtcagatttagataagggtaaatgtggggatattgtagga
gaacttattagtataaaattagctgaagattctaattcaatattaaatagtaataagaga
tatatgtattttgcagatagatttagaagaactataacaaaatctgttatggttattgca
gagcaaatgaaaagaggagaatttgaagtatttaaaaatgaattttcttttggaagcttt
aaagatggagagccaataaagatagatttacattcaaatgaaactgtatatttggtggga
agaatagatagaatagatactttaaatatggatggcaatacgtatataagaatagttgat
tataaatcaggggcaaagaagttcgatttaaatgaactgtattatggacttcaaatacaa
ctattagtatatttagatgcattaattaaaaattcacagtatcttttagataagcaagta
attccaggagctatattatattttagaatagatgatccaataataaaatcaaagaaagaa
ttatcggaagatgaaattcaaaagcaagtattagaaaaattaaaaatgaacggattactt
ttaaaagatgctaaattagttagggcaatggataaaaatatggagacatactcattagtt
ataccagcaacttttaaaaaagatggagatttcacaagtaaaagttcagtagttactgaa
gaacaatttaagcttttaagagaatatgtcaataagaaaatggtagatatttgtgaggag
atgttaagtggaactataaaaatagagccatgtaaatataatcagactacttattgtact
tattgtgattactcatctatatgtcaatttgatactggaatacaagataataaatataaa
attatattgaaaaaagataacgatgaaatttggcaatctatgaaagatacagttgaaggt
attgagaaggaaggtgaaaagtaa
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