Clostridium septicum: CP523_07870
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Entry
CP523_07870 CDS
T06069
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
csep
Clostridium septicum
Brite
KEGG Orthology (KO) [BR:
csep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csep03400
]
CP523_07870 (addA)
Enzymes [BR:
csep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CP523_07870 (addA)
DNA repair and recombination proteins [BR:
csep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CP523_07870 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
ResIII
AAA_12
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AYE34348
UniProt:
A0A9N7JKL2
LinkDB
All DBs
Position
1775474..1779208
Genome browser
AA seq
1244 aa
AA seq
DB search
MGDTKWTDEQLQSITTRGCNLLVAAAAGSGKTAVLVERIIRIITNESNPVDIDRLLVVTF
TSAAAAEMRERIAGAISKALEKNPNSKTLQRQLTLLSRSNITTMHSFCLDVIKNYFHTID
LDPSFRISDETENTLLKLEIINELFEDYYEEENESFKSLLEAYSGYRDDEKLKNIVLDLY
RFSMSGPWPEKWLLEKADEFNIDTLEELNSTEWVKILKENIAVETQGYLSMLNKAVEIIN
ETEGLEPYLPAFLSDIEALRRVYESLDNGMEDLYSSLSAVEFIKLKVVRKNNVSDEEAQK
TVKNIRDGIKKKIAKLIEDSFSMTPEESLKGIKNSYPYMRTLAEITLEFSKRFSEKKKEK
NILDFNDLEHFCLKILVDKDEKGDIKPSKVAEGFREFFDEVLVDEYQDSNNVQETIIDLV
SRKSLDNPNVFMVGDVKQSIYRFRQAKPELFLDKYNKYPLLEGEKNRKIQLYKNFRSREE
VINGVNYIFKMVMSKIVGELEYTEEEALNLGANYKEINEDDVMIAGPIELHILDKSGELY
NNEDDEVENEEEELDSITLEARIVAKRINELFNSKDGKVYKVLDKETGEYRPIKYKDIVI
LLRATKNWAEIFLDELGYEGIPVYADTGTGYFESIEIRTIMALLKIIDNPMQDVPMISVL
RSPIMGFTAEELGDIRLLDKDKYFYEIIRDIVENKYECDEELKIKCEALINGLNKWRRKA
VYTPIDEFIWFLYMDTAYYGYVGAMPNGKLRQANLKILFQRAKQYEQTSFKGLFNFINFI
NKLRKSSGDMGSAKILGENEDVVRIMSIHKSKGLEFPVVFTSGVGKQFNLMDLNNPILYH
DELGFGPEYVDLNKRNSYSTLAKEAIKKRIRLETLSEEMRILYVAFTRAKEKLIITGATR
NLEKTVSNWYSASTLDLNLILPSEVLKGKSYLDWIGMAMFKHRNGEVLRDYIGACGDGLS
NDFSTWSVQFWSKNDLVVDKKNQAVDNLEERELFITSKKSTVDKEIEKRLGYEYKYMYAG
TLPSNISVSDLKRAAYEDVDDEVRTVKIFGEKEIIKPRFLQEKKGLSASERGTIVHFIMQ
KIDLNSVSSIGEIKDQIEEMKNKKLITKEEADVVKYKKIQLFFESNLGERLLKAYNTGAM
IKREFPFFTEVSSLNIDKSLPKEIYENEMIRLQGIIDCFFEEDGEIVLLDYKTDFVEKDN
EEAIKEKYKVQIQYYKDAVEKVTGKKVKESYLYLFYLDKEVRLD
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atgggagatactaaatggacagatgaacaattacaatcaataactacaagggggtgtaat
cttctagtagcggcagcagctggatcaggaaaaacagcggtattagtagaaaggatcata
agaataataacaaatgaaagtaatcctgtagatattgatagattactagtagttactttt
acatcagcagcagcggcggaaatgagagaaagaatagcaggtgctatttctaaagcttta
gagaaaaatccaaactcaaaaacattacaaagacagctaacattattaagcaggtctaat
ataactactatgcattcattttgtttagatgttataaaaaattattttcatacaatagat
ttagatccaagttttagaatttcagatgaaacagaaaatactttgttaaaattagaaata
ataaatgagcttttcgaagattattatgaagaagaaaatgaaagttttaaaagtctatta
gaagcttatagtggctatagagatgatgaaaaattaaaaaatatagttttagatttgtat
agattttctatgagtggaccttggcctgaaaaatggttattagaaaaagcagatgaattt
aatatagatacattggaagaattaaatagtacagaatgggtaaagattttaaaggaaaat
atagctgttgaaacacagggatatttaagtatgttaaataaggctgtagaaataataaat
gaaacagaaggtttagaaccatatttacctgcatttttaagtgatatagaggcactaaga
agagtttatgaatccttagataatggaatggaagatttatatagtagtttatcagcagtt
gagtttataaagcttaaagtagttagaaaaaataatgtatcagatgaagaggcacaaaag
actgttaaaaatataagggatggaataaagaaaaaaatagctaaacttatagaagatagt
ttttctatgactccagaggaatctttaaaaggtataaagaattcatatccttatatgaga
acattagcggaaataacattagaattttctaaaagattttcagagaagaagaaagaaaaa
aatatattagattttaatgatttagagcatttctgtttaaagatattagtagataaagat
gaaaagggagatataaaaccatctaaagtagcagaaggatttagagagttttttgatgaa
gtattagtagatgaataccaggattctaataatgtacaagaaactataatagatttagta
tctagaaagagtttagataatccaaatgtatttatggttggagatgttaaacaaagtata
tatagatttaggcaagcaaaacctgaattgtttttagataagtataataaatatccatta
cttgaaggagaaaaaaatagaaagattcaattatataagaactttagaagtagagaagaa
gtaataaatggtgttaattatatatttaaaatggttatgtctaaaattgttggggaacta
gaatatacagaggaggaagcattaaatctaggagctaattataaagaaataaatgaagat
gatgttatgatagcaggacctatagaacttcatatattagataagtctggagaattgtat
aacaatgaggatgatgaagtagagaacgaagaagaagagttagattcaataactttagaa
gctagaatagttgctaaaagaataaatgaactttttaattcaaaagatggaaaagtatat
aaagttttagataaggaaactggagagtatagacccataaaatataaggatatagttatt
ttattaagagcaactaaaaattgggcagaaattttcttagatgagttgggatatgaagga
atacctgtttatgcagatacaggaacaggatattttgaatcaatagaaataagaacaata
atggcacttttaaaaatcatagataatcctatgcaggatgttcctatgatatctgtatta
agatcgcctattatgggatttacagcagaggaattaggagatataaggttattagataaa
gacaaatatttttatgagattatacgagatatagtagaaaataaatatgaatgtgatgaa
gagcttaaaataaagtgcgaagccctaataaatggattaaataagtggagaagaaaagct
gtttatacaccaatagatgaatttatatggtttttatatatggatacagcttattatggg
tatgtaggagcaatgccaaatgggaagcttagacaagcgaatttaaaaatacttttccaa
agagcaaaacaatatgagcaaactagctttaaagggctatttaactttataaattttatt
aataagttgagaaagtcttctggtgatatgggaagtgctaaaatattaggtgaaaatgaa
gatgtagttaggatcatgagtattcacaaaagtaagggacttgaatttcctgtagtattt
acatctggtgtaggtaagcaatttaatcttatggatttgaataatcctattttatatcat
gatgaattaggttttggaccagagtatgttgatttaaataaaagaaattcatatagtact
ttagcgaaagaagcaatcaaaaaaagaataaggttagaaacattatcagaggaaatgaga
atactatatgtcgcttttactagagctaaagaaaagttgataattacaggagcaactaga
aatttagaaaaaacggtatcaaattggtattcagcatcaactttagatttaaacttaata
ttaccttcagaagttttgaaagggaaaagttatttagattggattggaatggcaatgttc
aagcatagaaatggggaagttttaagagattatataggagcatgcggagatggtttatct
aatgacttttccacatggagtgtacaattttggagtaaaaatgatttagttgttgataaa
aaaaatcaggctgtggataatttagaagaaagagaactgtttataacttctaaaaagagc
actgtggataaggaaattgaaaaacgattaggttatgaatataaatatatgtatgcagga
actttaccaagtaatatttctgtttcagatttaaaaagagccgcatatgaagatgtagat
gatgaagtaaggacagtaaaaatatttggagaaaaagaaattataaagcctaggttttta
caagagaagaaggggttatcagcatctgaaagaggaactatagtacattttattatgcaa
aaaattgatttaaacagtgtcagtagtataggtgaaattaaagatcaaatagaagagatg
aaaaataaaaaattaataacaaaagaagaagctgatgtagtaaaatataagaagatacaa
ctattctttgaaagtaatttaggggaaagattattaaaagcatataatacaggggctatg
attaaaagagagtttcctttttttactgaagtgagtagcttaaatatagataagagttta
ccgaaagaaatttatgaaaatgaaatgataagacttcaagggattatagattgttttttt
gaagaagatggagaaatagttcttttagattataaaactgattttgttgaaaaagataat
gaagaggctataaaagaaaaatataaggttcaaatacaatattataaggatgcagtcgaa
aaagttactggtaaaaaggttaaagaaagttatttatatttattttatttagacaaagaa
gtaaggttggattag
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