| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
csep Clostridium septicum
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:csep00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CP523_08935 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:csep03021]
CP523_08935 (rpoC)
03400 DNA repair and recombination proteins [BR:csep03400]
CP523_08935 (rpoC)
Enzymes [BR:csep01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CP523_08935 (rpoC)
Transcription machinery [BR:csep03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CP523_08935 (rpoC)
DNA repair and recombination proteins [BR:csep03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CP523_08935 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
1999164..2002694
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| AA seq |
1176 aa
MFELNNFDAIQIGLASPGQIREWSRGEVKKPETINYRTLKPERDGLFCERIFGPIKDWEC
HCGKYKRVRYKGIVCDRCGVEVTKAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLLMDM
SPRALEKVLYFASYIVIDPKETPLLKKQLLNEKEYREAVDKYGDESFVAGMGAEAIQELL
GEIDLEGQSKDLKEELKTSTGQKKVRIIRRLEVVESFRKSGNDPKWMIINVIPVIPPDLR
PMVQLDGGRFATSDLNDLYRRVINRNNRLKKLLDLGAPDIIVRNEKRMLQEAVDALIDNG
RRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKMYQCGLPK
EMALELFKPFVMKKLVEDGVAHNIKSAKRMVERVNGQVWDILEEVIADHPVLLNRAPTLH
RLGIQAFQPVLVEGRAIKLHPLVCTAYNADFDGDQMAVHVPLSVEAQAEARFLMLAAGNI
MKPSDGKPVCVPTQDMVLGSYYLTMDKDGAKGEGKVFASKDEAIMAYEVGAIAIHAQIGV
RMFKEIDGEIKSGIIKTTVGKVIFNESIPQDLGFVDRSKEEEKFNLEVDFLITKKSLGTI
IDKCYAVHGPTNTSIMLDKIKALGYHYSSIGAVTVAASDMIVPEAKYDLLRDADETVNKI
EKMYKRGFISEDERYERVIEKWTKTTEEVADALMDSLDKFNPIFMMADSGARGSKSQIKQ
LAGMRGLMASPTGKIIELPIRASFREGLEVLEYFISTHGARKGNADTALKTADSGYLTRR
LVDVSQDVIVREFDCGTKEGIYVSEIKEGNEAIEGLAERLHGRYTAEDIIHPETGEVMVP
VDEYINLDMAEKVAATGIKKVKIRSVFTCSCKVGVCSKCYGMNMATAQKINIGEAVGIIA
AQSIGEPGTQLTMRTFHTGGVVGADITQGLPRVEELFEARKPKGLAIVSEITGTVRIEET
KKKRTVFVMSADGEERSYEIPFGSRLKVTDNDEIEAGDEITEGSVNPHDIMAIKGVDGAR
RYLLSEVQKVYRLQGVDINDKHLEVVVRQMTRKVKVSDSGDTELLPGTMIDMFDFNEENA
RVREFGGEEAKGEMALLGITKAALATDSFLSAASFQETTRVLTEAAIKGKVDPLIGLKEN
VIIGKLIPAGTGMMKYRSVKLDVEDVEEEEVINMAE |
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| NT seq |
3531 nt +upstreamnt +downstreamnt
ttgtttgaattgaataattttgatgctatccaaatagggcttgcttcacctggccaaatt
agagaatggtcaagaggagaagttaagaaacctgaaactataaattatagaactttaaaa
ccagaaagagatggtttgttctgcgaaagaatattcggacctattaaagactgggaatgt
cattgtggaaaatataagagagttagatataagggcatagtttgtgacagatgtggagtt
gaagttacaaaagccaaagtaagaagagaaagaatggggcatattgagttagctgcccct
gtatctcacatttggtactttaaaggtattccatcaagaatgggattacttatggatatg
tcaccaagagctttagaaaaagtattatactttgcatcttatattgttattgaccctaaa
gaaacaccattattaaagaaacaacttttaaatgaaaaagaatatagagaagctgttgat
aaatatggtgatgaaagcttcgttgctggaatgggagcggaagctattcaagaactactt
ggagaaattgatttagaaggtcaatcaaaagatcttaaagaagaattaaaaacaagtaca
ggtcaaaagaaagtaaggattataagaagattagaagttgttgagtcatttagaaaatca
ggaaatgatcctaaatggatgattataaatgtaattcctgtaattccaccagatttaaga
ccaatggttcaattagatggaggaagatttgcgacttcagatttaaatgatttatataga
agagttattaatagaaataacagattaaagaagcttttagatttaggagctccagatata
atcgttagaaatgaaaagagaatgctacaagaagcggtagatgctcttatagataatggt
agaagaggaagacctgttacaggtccgggaaatagacctcttaaatctctttcagatatg
cttaaaggtaaacaaggtagatttagacaaaacttacttggtaagagagttgactattct
ggtagatcagttatagtagttggaccagaattgaaaatgtatcaatgtggtcttccaaag
gaaatggctttagagttatttaagccatttgtaatgaagaaattagtagaagatggtgtg
gcacataacattaagagcgcaaagagaatggttgaaagagtaaatggtcaagtatgggat
atacttgaagaagttattgcagatcatccagttttattaaaccgtgcacctactctacac
agacttggtattcaagctttccaaccagtacttgttgaaggtagagctattaagttacat
ccattagtatgtacagcatataacgctgactttgatggtgaccaaatggctgttcacgta
cctttatcagtagaggcacaagcagaagctagattcttaatgcttgcagcaggaaacata
atgaagccttcagatggtaagccagtttgtgtaccaacacaggatatggttctaggttca
tattatctgactatggataaagatggagctaaaggagaaggtaaagtttttgcatcaaag
gatgaagctattatggcctatgaagtaggagctatagctattcatgcacaaattggtgta
agaatgtttaaagagattgatggagaaattaaatcaggaataatcaagactacagtaggt
aaggttatttttaatgaatcaatacctcaagatttaggctttgtagatagaagtaaagaa
gaggaaaagtttaaccttgaagttgatttcttaattactaagaaatcattaggtacaata
atagataaatgttatgcagtccacggaccaactaacacatctattatgctagataaaata
aaagcattaggatatcattattcatctattggagcggttacagtagcagcatcagatatg
atagtaccagaagctaagtatgatttacttagagatgcagatgaaactgttaataagatc
gaaaagatgtataagagaggtttcatatctgaagatgaaagatatgaaagagttatagaa
aagtggactaaaacaactgaagaagttgcggacgcattgatggatagcttggacaaattt
aatccaatattcatgatggccgattcaggagccagaggatctaaatctcaaattaaacaa
ttagctggtatgagaggtcttatggcaagtccaacaggtaagattatagagttaccaatc
agagcatcatttagagaaggtcttgaagttttagagtactttatatctactcacggtgct
agaaaaggtaatgccgatacagcacttaagactgccgattcaggatatttaacaagaaga
cttgttgacgtatcacaagatgttatcgtaagagaatttgattgcggaacaaaagaaggt
atatatgtatctgaaattaaagaaggaaatgaagctatcgaaggattggctgaaagactt
catggaagatatacagctgaagacataattcatccagaaacaggagaagttatggttcca
gttgatgaatatattaatttagatatggcagaaaaagtagctgctacaggaattaaaaaa
gttaaaatcagatcagtatttacatgtagctgtaaagttggagtttgttctaagtgttat
ggtatgaacatggctactgctcaaaagataaatataggtgaagctgtaggtataatagca
gcacaatctatcggggaaccaggaacacagcttacaatgagaacattccatacaggtgga
gttgttggagcagatatcactcaaggtcttcctagagttgaagaattatttgaagctaga
aaaccaaagggattagctatagtaagtgaaattactggtactgtaagaatagaagaaact
aaaaagaagagaactgtatttgtaatgtcagcggatggtgaagaacgtagttatgaaata
ccattcggatctagattaaaggttacagataatgatgaaatagaagctggagatgaaatt
acagaaggttcagtaaaccctcatgatataatggcgataaagggtgtagatggagctaga
agatacttactttcagaagttcaaaaagtttatagacttcaaggggttgatatcaatgat
aagcacttagaagttgttgttagacaaatgacaagaaaagtaaaggtatctgattcagga
gatacagaattattaccaggaacaatgatagatatgttcgatttcaatgaggaaaatgct
agagtgagagaattcggtggagaagaagctaaaggagaaatggcattattaggtattact
aaagctgccttagctacagatagtttcttatcagctgcatcattccaagaaacaacaaga
gttcttactgaagctgctattaagggtaaagttgatccattaataggattaaaagaaaat
gtaattattggtaaacttataccagcaggaacaggtatgatgaaatatagatcagtaaaa
ttagatgtagaagatgttgaagaagaagaagtaataaatatggcagaataa |
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