KEGG   Clostridium septicum: CP523_10285
Entry
CP523_10285       CDS       T06069                                 
Name
(GenBank) ATP-dependent RecD-like DNA helicase
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
csep  Clostridium septicum
Pathway
csep03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:csep00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    CP523_10285
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csep03400]
    CP523_10285
Enzymes [BR:csep01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     CP523_10285
DNA repair and recombination proteins [BR:csep03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     CP523_10285
SSDB
Motif
Pfam: AAA_30 AAA_19 HHH_RecD2 SH3_13 OB_YrrC UvrD_C_2 AAA_11 Viral_helicase1 Helicase_RecD HHH_5 PIF1 AAA_22 DNA_pol_lambd_f PhoH ATPase_2 nSTAND3 SLFN-g3_helicase NTPase_1 AAA AAA_23 NPHP3_N UvrD-helicase AAA_28 AAA_29 HerA_C HHH_2 T2SSE ABC_ATPase Thymidylate_kin AAA_12 AAA_5 ATP_bind_1 Ribosomal_S13 SRP54 ABC_tran AAA_18 cobW TraI_hel_assoc_N AAA_17 SMC_N MeaB AAA_16
Other DBs
NCBI-ProteinID: AYE34757
UniProt: A0A9N7PM77
LinkDB
Position
2242591..2244822
AA seq 743 aa
MEILNGIVETIVFKSDDTGYVVSKIRIDKETINAVGVAPFLKEGQQVKIKGQWVIHKQFG
RQFNIEEYEEVLPNSVEGIEKYLSTGIIHGIGPVTAKKIVQKFGVDTLDILDNHIERLKE
IEGIGERKFKIIYESYIEQQGLKDIMIYFQSHGITTNQCIKIYKKYGDQSRYVVEENPYV
LSDEISGIGFITADKIAKNIGIEITSPYRVQSGIRYVLNQFSASGNTYMPKEQLIDEVAK
VLVVDKELVEENIYNCSLEGKIKIEKIGDIEGVFLLPYYYCELGVTNKIITLGIENFRTI
NTDIEFEIKSFEKKNNIEFAQSQREAIIGAFDNGIEIITGGPGTGKTTIIKAIIEIYENN
GMNVLLAAPTGRAAKRMTESTGREAKTIHRLLEMGVSDDENSFFGKGETSPLEGDVVIID
EASMIDIMLMHNLLKAIKLGTRLIIVGDVDQLPSVGAGNVLKDLIESNFIKVVRLKDIFR
QGKESMIVTNAHKINNGEMPQTNRKDGDFFFENKQDLDDILNTIIDLINRRLPKFNNNWD
KLRDMQVLTPTRKGTLGVQNLNNKLQEVLNPKASYKKEKSLKEVIFREGDKVMQTKNNYS
LKWFRINGEGDNEGVGVFNGDMGFIESINEDEKTITIIFDDERKVIYDYIYIDELELAYA
ITIHKSQGSEFKVIITPAFMGSPFLMNKNLLYTGITRAKELVVVVGVPKALKYMVSNVRS
MDRYSSLKERILDITSKEVFSEE
NT seq 2232 nt   +upstreamnt  +downstreamnt
atggaaatcctaaatggaatagtagaaacgattgtatttaaaagtgatgatacaggatat
gtagtttcaaaaataagaatagataaagagacaattaatgctgttggtgttgcacctttt
ttaaaagagggtcagcaagtaaagattaaaggtcagtgggtaatacataaacaatttgga
agacaatttaatatagaggaatacgaagaagttttacctaattcagttgaaggaatagaa
aaatacttaagtacaggaataatacatggaataggaccggtaactgctaagaaaatagtt
caaaaatttggcgttgatacactggatattttagataatcatatagaaagacttaaagaa
atagaggggataggtgaaaggaaattcaaaataatatatgaatcctacattgagcagcag
ggcttaaaggatattatgatttattttcaaagtcatggaattacaactaatcaatgcata
aaaatatataaaaaatatggagatcaatcaagatatgtggttgaagaaaatccttatgtg
ctttcagatgaaatatctggaataggatttataacagcagataaaatagctaaaaatatt
ggaattgaaattacctctccttatagagttcaaagtggaataagatatgttttaaatcaa
ttttcagcatcaggtaatacgtatatgccaaaagaacaattaattgatgaagtagctaag
gtgttagttgttgataaagagttagtagaagaaaatatatataattgcagtttagaaggt
aaaataaaaatagagaaaattggtgatatagaaggggtatttttactaccatattattat
tgtgaattaggtgtaacaaataaaataataactttaggtatagaaaattttagaacaata
aatacggatattgaatttgagataaaatcttttgaaaagaaaaataatatagaattcgca
caatcacaaagagaggctataataggggcttttgataatggaatagaaataataacaggc
ggaccaggtacaggaaaaactacaattataaaggctataatagaaatttatgaaaacaat
ggaatgaatgtactattagctgcacctacaggaagagctgcaaaaagaatgactgaatct
acaggaagagaagctaaaactatacatagactacttgaaatgggagttagtgatgatgaa
aattctttttttggaaaaggagaaacatctccactagaaggagacgtagtaattatagat
gaggcatcgatgattgatataatgcttatgcataacctattgaaagcaataaagttagga
actcgattaattatagttggagatgtagatcaattaccatcagttggggcaggaaatgtt
cttaaagatcttatagaaagtaattttattaaagttgtaagacttaaggatatttttaga
caaggaaaagagagcatgattgtaacaaatgcgcataagataaataatggagaaatgcct
caaactaatagaaaagatggggatttcttttttgaaaataagcaagatttagatgacata
ttaaatacaataatagatttaataaatagaagattacctaaatttaacaataattgggat
aaacttagagatatgcaagttttaacaccaactagaaaaggaactttaggcgttcaaaat
ctaaataataaacttcaagaagtattaaaccctaaagcatcttataagaaggaaaaatct
ttaaaagaagttatctttagagaaggggataaagtaatgcaaactaaaaataattattcc
cttaaatggtttagaataaatggagaaggagataatgaaggtgttggtgtatttaatgga
gatatgggatttatagaaagtataaatgaagatgaaaaaacaattacaataatttttgat
gatgagagaaaagttatatatgattatatatatatagatgagttagaattagcttatgcc
ataacaattcataaaagtcaaggaagtgaatttaaggttataattacaccagcatttatg
ggttctccttttttaatgaataagaatcttttatatacaggaataacaagggctaaagag
cttgtagtggttgttggagttcctaaagcattaaaatatatggtttctaatgttagaagc
atggatagatattcttctcttaaagagagaatcttagatataacatcaaaagaagttttt
agtgaagaataa

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