Clostridium septicum: CP523_10715
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Entry
CP523_10715 CDS
T06069
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
csep
Clostridium septicum
Brite
KEGG Orthology (KO) [BR:
csep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csep03009
]
CP523_10715
Enzymes [BR:
csep01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CP523_10715
Ribosome biogenesis [BR:
csep03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CP523_10715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Cons_hypoth95
N6_N4_Mtase
Methyltransf_15
PrmA
Methyltransf_32
TRAM
Methyltransf_11
TRM5-TYW2_MTfase
Methyltrans_SAM
Methyltransf_12
FtsJ
PCMT
UPF0020
QRPTase_C
Methyltransf_4
Ubie_methyltran
Saf-Nte_pilin
DOT1
Motif
Other DBs
NCBI-ProteinID:
AYE34837
UniProt:
A0A9N7JNH1
LinkDB
All DBs
Position
2336281..2337636
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AA seq
451 aa
AA seq
DB search
MRRGSALQVKIEKTEFPSVGIGTVGDKKIFVKGAFPGQIVTGKVKKRRQEYAELKLLSVD
EKADYEIEAPCKYFGICGGCSSQNLTYEKQLELLNGEVKNLFEKGNAPMGEYLGVVGSKN
QWEYRNKMEFTFGDFEKGGELTLGMHMKGKSFGIITVDNCMIVDEDFRTVIKATVDYFKD
KELPYYRVMRREGYLRHLVIRKAINTGELMVNLVTTTQIDFDLTEYVEVLKSRIYKGQLV
SVLHTENDSFSDAVVPEKVNLLYGKDYIVENLLGLKFKISPFSFFQTNTQGAESLYSIVR
DFMGESSDKVVFDLYCGTGTIGQIAAANAKKVIGIELIEEAVEAAKENAKLNGLNNCEFL
AGDVGEIIKTIKVKPDIIILDPPRSGVHPKALEYVIKFNAKEIIYVSCNPKTLVENLETL
VASGYEVIKSTVKDMFPNTPHAETVVKLIKK
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaggtagtgcactacaagttaaaatagaaaagacagagtttccatcagtaggt
ataggtacagttggagacaaaaaaatatttgtaaaaggagcatttccagggcaaatagtt
acaggaaaagtaaaaaaaagaaggcaagaatatgcagagttaaagcttttatcagttgat
gaaaaagctgattatgaaatagaagcgccatgtaaatactttggaatttgtggtggatgt
agctcacaaaatcttacttatgaaaaacaattagaacttttaaatggtgaagtaaagaat
cttttcgaaaaaggaaatgctcctatgggagagtatttaggtgttgttggaagtaagaat
caatgggagtatagaaataaaatggaattcacctttggagactttgaaaaaggtggagaa
cttacacttggaatgcacatgaaaggaaaatcatttggtattattacagttgataattgt
atgatagtagatgaagactttagaactgttataaaagcaactgttgattactttaaagat
aaggaattaccttattatagagtaatgagaagagaaggttacttaaggcatttagtaata
agaaaagctattaatacaggagaattaatggttaatttagtaactacaactcaaattgac
tttgatttaactgagtacgtagaagtattaaaaagtagaatttataaagggcaattagtt
tctgtattacacacagaaaatgattctttctcagatgcagttgtgccagaaaaagtgaat
ttattatatggaaaagattatatagtagaaaatttattaggattaaaatttaaaatatca
ccattttcattcttccaaactaatacacaaggggcagaaagtctttatagtatagtaaga
gattttatgggagaatcttctgataaggtagtatttgacttatattgtggaacaggaact
ataggacaaatagcagcagcaaatgctaaaaaggttataggtatagaacttatagaagaa
gctgttgaagcagcaaaggaaaatgctaaattaaatggattaaacaattgtgagttttta
gctggtgatgtaggagagataataaaaactataaaagtgaaaccagatataattatatta
gatcctccaagaagtggggttcatcctaaggctttagaatatgtaataaaatttaatgca
aaagagataatttatgtttcatgtaatcctaaaacattagttgaaaatttagaaacatta
gttgcctcaggttatgaggtaataaagagtactgttaaggatatgttccctaacacacca
catgcggagactgttgttaaacttataaagaagtag
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