Clostridium septicum: CP523_14170
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Entry
CP523_14170 CDS
T06069
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
csep
Clostridium septicum
Pathway
csep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CP523_14170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csep03400
]
CP523_14170
Enzymes [BR:
csep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CP523_14170
DNA repair and recombination proteins [BR:
csep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CP523_14170
RecFOR pathway proteins
CP523_14170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
RNA_helicase
AAA_16
nSTAND3
AAA_22
Sigma54_activ_2
MCM
bpMoxR
AAA_18
AAA_14
Bac_DnaA
AAA_3
DUF815
NTPase_1
TsaE
AAA_2
AAA_24
ABC_tran
AAA_17
NB-ARC
Rad17
AAA_28
AAA_25
AAA_PrkA
IstB_IS21
Parvo_NS1
NACHT
NPHP3_N
AAA_33
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AYE35483
UniProt:
A0A9N7JMT2
LinkDB
All DBs
Position
3078832..3079860
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AA seq
342 aa
AA seq
DB search
MERIITPEEILEDSNGLSLRPQTINEYIGQDKVKERLNIFIKAAKNRGEALDHVLLYGPP
GLGKTTLANIIAKEMGGELKITSGPAIERAGDLAAILTTLKDNDVLFIDEIHRLNRNVEE
ILYPAMEDYVLDIVIGKGAAAKSIRLDLPKFTLIGATTRIGMLTSPLRDRFGVLCDMEYY
TEEQLKDIIIRSAFVLNCDITEEGALELARRSRGTPRIANRLLKRVRDYAEVYSDSLISF
KEAKAALELLEVDNKGFDRVDNKILEAIIDNFDGGPVGIETLSYFIGEELGTIEDVYEPY
LLQTGFIVRTARGRIATEKAYEHLGRSKGKKKQKDAQQTFFK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaataataacacctgaagagattttagaagatagtaatggattaagtttaaga
cctcaaactataaatgaatatattggtcaagataaagtaaaagaaagactaaatatattt
attaaggctgctaaaaatagaggtgaagcattagatcatgttcttttatatggtccacca
ggacttgggaaaaccacccttgctaatataatagcaaaagaaatggggggagagcttaaa
ataacttcaggtcctgcaatcgaaagagctggtgatttagctgctatattaactacccta
aaagataatgatgtattatttatagatgaaatacataggcttaatagaaatgtagaagaa
atattatatcctgctatggaggattatgttttagatatagtaattggtaaaggtgcagct
gcaaagtctataagacttgatttaccgaagtttacacttattggagcgacaactagaata
ggaatgttaacatcacctcttagagatagatttggcgtactttgtgatatggaatattat
acagaagaacaattaaaagatataataataagatcagcatttgtgcttaattgtgatatt
actgaggaaggcgctttagaacttgcaagaagatctagaggaactccaagaattgcaaat
agattattaaagagagtcagagattatgctgaagtgtattctgattctttaataagtttt
aaagaagcaaaggcagctcttgaacttctggaggtagacaataagggctttgatagagta
gataataaaatattagaagcaataatagataattttgatggaggccctgttggaatagaa
acattatcctattttattggagaagagcttggaacaattgaagatgtttatgagccatat
ttacttcaaacaggatttatagttagaacagcaaggggaagaattgctacggagaaagct
tatgaacatttaggaagaagtaaagggaaaaagaaacagaaggatgcacaacaaacattt
tttaaatag
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