Clostridium septicum: CP523_15570
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Entry
CP523_15570 CDS
T06069
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
csep
Clostridium septicum
Pathway
csep03420
Nucleotide excision repair
csep03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CP523_15570
03430 Mismatch repair
CP523_15570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csep03400
]
CP523_15570
Enzymes [BR:
csep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CP523_15570
DNA repair and recombination proteins [BR:
csep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CP523_15570
MMR (mismatch excision repair)
Other MMR factors
CP523_15570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
RNase_T
AAA_19
UvrD_C_2
Viral_helicase1
DEDDh_C
AAA_12
DEAD
AAA_30
ResIII
AAA_11
AAA_7
DNApol_Exo
Nt_Gln_amidase
MGDG_synth
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AYE35739
UniProt:
A0A9N7JPB7
LinkDB
All DBs
Position
3354270..3356864
Genome browser
AA seq
864 aa
AA seq
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MPTSLNIKQREVVEELDKNILLLASAGTGKTNTLAYRISNIIEKNRAKEEEILCITFTNK
ASKEMQERIERILKKNSNKVIIKTFHSFCFDILKKQAKKSTDIYTDFVIFDEEDCKEVIG
TVNYFNFPLLSLQNFISLIKENIGMLNLYSDNSLKDYEEVIKRVYKEKYEEIKRICVSEE
YSTNYNMINILEKEGAKIVQSYNSALYNNHGLDFNDLIIKVHQLFKDTTVVENLRRKFKY
ISIDEVQDTSYLEYEIIEKLFYGSNILLCGDQFQTIYQWRGSIPDLIIKDFTKKYNPKEI
VFNENYRATKNLIDASFRYLKNTFSMEVEKVYKNQIKAVNNMDGEKICFNSLNNIKDEAR
FIFDEIKKLDIKDISKICVLTRNNRYNTNLSKEFIRLNLNLPKEERLNFILIDEFRFFRR
QEIKDIIATLKLCVNKYDSNSLKRIIKRFKFGISSKIIEIIESDIYKEVGISINDFIDKK
THIYGEKYSLLVKEFNNNNLIVFDVESTGVDTTKDEIIQIAAIKIDSQGKIIDKFQRVLK
NNKSVMNSERVHGFSDEYLKVHGEDKIKVLKEFLEFSKEALIVGHNVQYDINILNSELKR
NNLGSHSFLDFYDTLEIYRRFYPNLENYKLETLSRIFKIKNKPTHDAMDDILATADLLVI
AIKDKIIPLAFERQMLTGKYLGNFKELSVKLEKLKEESKFKRPKDIIVKVIKEFNIKKLY
EKEPQRIFRLREFYSISKELDDFRLSPEDSMIELLKVTSLSNGDMERILKNQSRIPIITV
HQAKGLEFDYVFLAGMEENVFPSYQSIKSSNLKEEERVFYVAITRAKKKLYLTYSKSSNG
KRNNISRFIFKIPKEFIKNISTEV
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgccaactagtcttaatataaaacagagagaagttgtagaagaacttgataaaaatatt
ttattgcttgcatcggcaggaacagggaaaacaaatactttagcatatagaatttctaat
ataatagaaaaaaatagagctaaagaagaagaaatattatgtattacatttacaaataag
gcaagtaaagaaatgcaagaaagaattgaaaggatattgaaaaaaaatagtaataaagtt
attattaaaacttttcatagtttttgttttgatatattaaagaaacaagctaaaaaaagt
actgatatatacacagattttgttatatttgatgaagaggattgtaaagaagttatagga
acagttaattattttaattttcctctactttctcttcaaaattttatttccttaataaaa
gaaaatataggaatgttaaatttgtattcagataattcattaaaagattatgaagaggtt
ataaagagagtatataaggaaaaatatgaagaaattaaaagaatatgtgtatctgaggaa
tattctactaattataatatgataaatatattagaaaaagaaggcgctaaaattgtacaa
agttacaatagtgctttatacaataaccatggattagattttaatgatcttattataaaa
gtacatcaattatttaaagatactactgtagtagaaaacttaagaagaaaatttaagtat
ataagtattgatgaagttcaagatactagttacttggaatatgaaataatagagaaatta
ttttatggaagtaatatattgctttgtggtgatcaatttcaaacaatatatcaatggaga
ggatctattccagatttaataataaaggattttactaaaaaatataatccgaaagagata
gtttttaatgaaaattatcgtgcaactaaaaatcttatagatgcatcttttaggtattta
aaaaatactttttctatggaagtagaaaaagtatataaaaatcaaatcaaagctgtaaat
aatatggatggagaaaaaatttgctttaattcgttaaataatataaaagatgaggcaaga
tttatatttgatgaaataaaaaagttagatataaaagatatttctaaaatttgtgtactt
actagaaacaatagatataatactaatttatctaaggaatttattagacttaatttaaat
ttaccaaaagaagaaagattaaattttatactaatcgatgaatttaggttttttagaagg
caggaaattaaagatattatagcaactttaaaattatgtgtaaataaatatgattcaaat
agcttaaagagaataattaaaagatttaagtttggtatatcttctaaaattattgagatt
atagaatcagatatatataaagaagtaggaataagtattaatgatttcatagataagaaa
actcatatttatggtgaaaaatactcattactcgtaaaagagtttaataataataatcta
attgtctttgatgttgaaagtacaggtgtggatacaacaaaagatgaaataatacaaata
gctgcaataaaaatagactcacaaggtaaaataatagataagttccagagggtgcttaaa
aataataaatcagtaatgaattcagaaagagtacacggatttagtgatgaatatttaaaa
gtacatggagaagataaaataaaggttctaaaagagtttttagaattttctaaagaagca
cttattgttggacataatgtccaatatgatataaatatattaaatagtgaattaaaaaga
aataatttggggtctcatagttttttagatttttatgatacattagaaatatacagaaga
ttctatcctaatttagaaaattataaattagaaacattaagtagaatttttaaaataaag
aataaaccaactcatgatgcaatggatgatattttagcaactgcagatcttttagtgata
gctataaaagataaaataatacctttagcatttgagagacaaatgttaacaggaaaatac
ttgggaaattttaaagaattaagtgtaaagcttgaaaaattaaaagaggaaagtaaattt
aaaagacctaaagatataatagttaaagttattaaagagtttaatattaaaaaattatat
gaaaaagagccacaaagaatttttagattaagagagttctattctatttctaaggagtta
gatgattttcgattgagtccagaggattctatgatagagttattaaaagtaacatccctt
tcaaatggagatatggaaagaatattaaaaaatcaatcaagaattcctataataacagtt
catcaagctaaaggactagaatttgattatgtatttttagcaggcatggaagaaaatgta
tttccatcataccaatcaataaagagctctaatttgaaagaagaggaaagagttttctat
gtagctattactagagctaaaaagaagctttacttaacttattcaaaaagctcaaatgga
aaaagaaataatataagtagatttatatttaaaataccaaaagaatttataaaaaatata
agtaccgaagtttaa
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