Comamonas serinivorans: CCO03_01125
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Entry
CCO03_01125 CDS
T04892
Name
(GenBank) hypothetical protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cser
Comamonas serinivorans
Pathway
cser03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cser00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CCO03_01125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cser03400
]
CCO03_01125
Enzymes [BR:
cser01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CCO03_01125
DNA repair and recombination proteins [BR:
cser03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CCO03_01125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ARU03469
UniProt:
A0A1Y0EJC8
LinkDB
All DBs
Position
251037..252053
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AA seq
338 aa
AA seq
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MSLDLDARQRAMLAEMGVTVWAPKAAPAPPLARAPELAEPTRPVEAAQPAGAAALSPPAL
SESPPTFAAAAPSEAAPQAESQPPVARDLAPAQVQEDLADDAVSNQIVHITNDNPRIPHS
QVPQTTHVAALAAQQVAELTAVNPAGVAEMDWARLQATVADCRACRLCERRTQAVFGVGA
TRADWMVVGEAPGEQEDRRGEPFVGPAGQLLDAMLQAVGVNRQAPAGDQAVYIANVLKCR
PPGNRNPQPDEVAQCEAYLRRQVALVQPKLILALGRFAVQSLLNTTEPIGRLRQQVHHYQ
GVPVIVSYHPAYLLRNLPDKAKAWADLVLAMRVAGRLG
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgagcctggacctggatgcccgccaacgggccatgctggctgaaatgggggtcacggtg
tgggcgcccaaagcggcgccggcgccgccactggccagggcgcctgagctggcggagccc
acccggccggttgaggccgcgcagccggctggcgctgcggcgctgtcgccccccgcgttg
tccgagtcgccgccgacgttcgctgctgccgcgccctcggaggctgcgccgcaggccgag
tcccagccgccggtcgcgcgcgatctggcccccgcgcaggtgcaggaagatttggctgat
gacgcagtatcaaaccaaatcgttcacatcacaaacgacaatccacgtataccccattca
caggtgccgcagaccacccatgtggcggccttggccgcccagcaggtggccgagctgacc
gcggtcaacccggccggggtcgccgagatggactgggcccgcctgcaggccacggtggcc
gattgccgcgcctgccgcctgtgcgagcgccgcacccaggcggtgttcggcgtcggggcc
acgcgtgccgactggatggtggtgggcgaggcgcccggcgagcaggaggaccggcgcggc
gagcccttcgtcgggcccgcaggccagttgctcgacgccatgctgcaggccgtgggggtc
aaccgccaggcgccggccggcgatcaggcggtctacatcgccaacgtgctcaagtgccgc
ccgcccggcaaccgcaacccgcaaccggacgaagtggcccaatgcgaggcctacctgcgc
cgccaggtcgcgctggtgcagcccaagctcatcctggcgctgggccggttcgccgtgcaa
tcgctgctgaacaccaccgagcccatcggccgcctgcggcagcaagtgcaccactaccag
ggggtgccagtgatcgtcagctaccaccccgcctacctgttgcgcaacctgcccgacaag
gccaaggcctgggctgacttggtgttggccatgcgcgtggccggtcgcctgggctga
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