Comamonas serinivorans: CCO03_03075
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Entry
CCO03_03075 CDS
T04892
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
cser
Comamonas serinivorans
Brite
KEGG Orthology (KO) [BR:
cser00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cser03016
]
CCO03_03075
Enzymes [BR:
cser01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CCO03_03075
Transfer RNA biogenesis [BR:
cser03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CCO03_03075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Myosin_N
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
ARU03800
UniProt:
A0A1Y0EK13
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All DBs
Position
complement(737297..739387)
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AA seq
696 aa
AA seq
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MNVLFDEAGKFLAGRILSEAEASAQVELDSGKRVKVKSANQLLRFDKPGPGELIAQAQQL
VPSIELALAWEFAPDDEFGFADLAADYFGDAPSLAQQVAALFALHEAPHYFRRAGKGRFK
KAPAEIVQQALAAIEKKARIQAEIDTWAQQLAQGQCPEPVATQLYKILFRPDKNAPEYKA
VVQAAKATQKPPLTLLQAAGAISSPYQFHWQRFLFEHFPKGTGFPPLSAPAITDTLPLAS
VQAYSIDDSSTTEIDDALSVQGLGSGTVTVGVHIAAPGLAFGPDSPLDAVARQRLSTVYM
PGYKITMLPDEVVEAYTLGEGVPRPAISLYVTFDEASLAITGQRTLLEQVPIYANLRHDK
LGGVVTPEWLETDSPTVAPHLDEATLARLTHLRPELSFLHRLARHLKAQREQVRGKPENF
NRPDYSFKLVGQNPDADDAVPTGDETVQISVRPRGEALDLIVSEAMILANSTWGTWLGEL
GVPGIYRSQASMAPGVKVRMGTKALPHAGIGVKSYAWSTSPLRRYVDLVNQWQLIAAARH
GATAALAAPFKPKDASLFSIVSSFDTAYSAYNGNQAQMERFWTLRHLQQAGLTELTGAVI
KDLPGGAWLVRADDLPLVFPVMGSQLLARGAHVRVALGQVDLISLDVNGTVLERLDDVVT
SADEDEDEDAPQAGPLHIAMDVNEAEGADTPAPTPS
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttttattcgacgaagccggcaagttcctggccggccgcatcctttccgaagcc
gaggcatccgcccaggtcgagctcgactcgggcaagcgcgtcaaggtcaaaagcgccaac
caactgctgcgcttcgacaagcccggccccggcgagctgatcgcgcaggcccagcagctg
gtgcccagcatcgagctggcgctggcctgggaatttgcccccgacgacgaattcggcttt
gccgacctcgcggccgactacttcggcgacgcgcccagcctggcacagcaggtggcggcg
ctgttcgcgctgcacgaggccccgcattacttccgccgcgcgggcaagggccgcttcaag
aaggcgccggccgagatcgtgcagcaggccctggcggccatcgagaagaaagcccgcatc
caggccgagatcgacacctgggcccaacagctggcgcaagggcagtgccccgaacccgtg
gccacgcagctctacaagatcctgttccggcccgacaagaacgcgcccgagtacaaggcc
gtggtgcaggccgccaaggccacgcaaaagccgccgctgacgctgctgcaggcggccggc
gccatcagctcgccctaccagttccactggcagcgcttcctgttcgaacacttccccaag
ggcacgggcttcccgccgctctcggccccggccatcaccgacacgctgccgttggccagc
gtgcaggcctactccatcgacgactcctcgacaacggaaatcgacgatgcgctctcggtg
cagggcctgggttcgggcacggtcacggtgggcgtgcacatcgccgcgcccggcctggcc
ttcgggcccgacagcccgctggacgccgtggcgcgccagcgcctgtccacggtctacatg
ccgggctacaagatcaccatgctgcccgacgaggtcgtggaggcctacacgctgggcgaa
ggcgtgccgcgcccggccatttcgctctacgtcaccttcgacgaggccagcctggccatc
accggccagcgcacgctgctcgagcaggtgcccatctacgccaacctgcgccacgacaag
ctcggcggcgtggtcacgcccgagtggctggaaaccgacagccccacggtggccccccac
ctggacgaggcgacgctggcgcgcctgacccatttgcgtcccgagttgtcgttcctgcac
cggctggcgcgccacctcaaggcccagcgcgaacaggtgcgtggcaagcccgagaacttc
aaccggcccgactacagcttcaagctggtcggccagaaccccgacgccgacgacgcggtg
ccgaccggcgacgagacggtgcagatcagcgtacgcccgcgtggcgaagcgctggacctg
atcgtctccgaagccatgatcctggccaacagcacctggggcacctggttgggtgagctg
ggcgtgcccggcatctaccgcagccaggccagcatggcgcccggcgtcaaggtccgcatg
ggcaccaaggcactgccgcatgccggcatcggcgtgaagagctatgcctggagcacctcg
cccctgcgccgctacgtcgacctggtcaaccagtggcagctgattgccgccgcgcgccac
ggggccaccgccgcgctggccgcgcccttcaagcccaaggacgccagcctgttctccatc
gtcagcagcttcgacaccgcctacagcgcctacaacggcaaccaggcgcagatggagcgc
ttctggacgctgcgccacctgcagcaggccggcctcacggagctgacgggcgccgtcatc
aaagacctgcccggcggcgcctggctggtgcgtgccgatgacctgccactggtcttcccc
gtcatgggcagccagctgctggcgcgcggcgcgcacgtgcgcgtggccctgggccaggtc
gacctgatcagcctggacgtgaacggcaccgtgctcgaacgcctggacgacgtcgtcacc
tcggccgacgaggacgaggacgaggacgcgccccaggccggcccgctgcacatcgccatg
gacgtgaacgaggccgaaggcgcggacaccccggcccccacgccgtcctga
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