Comamonas serinivorans: CCO03_04840
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Entry
CCO03_04840 CDS
T04892
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
cser
Comamonas serinivorans
Pathway
cser00300
Lysine biosynthesis
cser00470
D-Amino acid metabolism
cser01100
Metabolic pathways
cser01110
Biosynthesis of secondary metabolites
cser01120
Microbial metabolism in diverse environments
cser01230
Biosynthesis of amino acids
Module
cser_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cser00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CCO03_04840
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CCO03_04840
Enzymes [BR:
cser01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
CCO03_04840
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
GTP_EFTU_D4
RedAm-like_C
Motif
Other DBs
NCBI-ProteinID:
ARU04090
UniProt:
A0A1Y0EKW5
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All DBs
Position
complement(1152631..1153878)
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AA seq
415 aa
AA seq
DB search
MSNPFSAAQLWALADEFGTPLWVYDAATIRERIAQLQAFDTVRFAQKACSNIHILSLMRE
RGVRVDAVSRGEILRALAAGYQPGFDEPAPIVFTADVFDPATLATVVEHRVPVNAGSIDM
LDQLGAASPGHAVWLRINPGFGHGHSNKTNTGGEHSKHGIWHGDLAAALAAVQRNGLTLV
GLHMHIGSGVDYAHLQNVCGAMVGLVEQTRAAGMDLQALSAGGGLSIPYQAGGDRIDTAH
YFSLWHAARQQAEAIVGHALHLEIEPGRFLVAESGVLLGQVRAVKNQGRSHFVLVDTGFN
ELMRPSMYGSYHAMGLLRRDGSQAAEVASVVAGPLCESGDVFTQGEGGVVLPRMLPAAQV
GDLLVIHDTGAYGASMSSNYNTRPLAAEVLVDGGQARLIRRRQTVDDLLALETGL
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatcctttttctgccgcccagctctgggccctggccgacgagttcggcaccccg
ctgtgggtgtatgacgccgccaccatccgcgagcgcatcgcccagctgcaggccttcgac
accgtgcgctttgcgcaaaaagcctgctccaacatccacatcctgtcgctgatgcgcgag
cgcggcgtccgggtcgatgccgtctcgcgcggcgagatcctgcgcgcgctggccgccggc
taccagcccgggtttgacgagcccgcccccatcgtcttcacggccgacgtgttcgacccg
gccacgctcgccaccgtggtcgaacaccgcgtgcccgtgaacgccggctccatcgacatg
ctggaccagctcggcgcggcctcgcccggccatgccgtgtggctgcgcatcaaccccggc
ttcggccacggccacagcaacaagaccaacaccggcggcgagcacagcaagcacggcatc
tggcacggcgacctggccgcggccctggccgccgtgcagcgcaatggcttgacgctggtc
ggcctgcacatgcacatcggctcgggcgtggactacgcccacctgcagaacgtctgcggc
gccatggtcggcctggtcgagcaaacccgcgccgcgggcatggacctgcaggccctgtcg
gccggcggcgggctgtccatcccctaccaggcggggggcgatcgcatcgacaccgcgcac
tacttcagcctgtggcatgccgcgcgtcagcaggccgaggccatcgtgggccatgccctg
cacctggagatcgagcccggccgtttcctcgtggccgaatcgggcgtgctgctgggccag
gtgcgcgccgtcaagaaccagggccgctcgcatttcgtgctggtcgacacgggcttcaac
gaactgatgcgcccctccatgtacggcagctaccacgccatgggcctgctgcgccgggat
ggcagccaggccgccgaggtggccagcgtggtggcgggcccgctgtgcgaatcgggggac
gtgttcacccagggcgaaggcggcgtggtgctgccgcgcatgctgccggccgcgcaggtc
ggcgacttgctggtgattcacgacaccggcgcgtatggcgccagcatgtccagcaactac
aacacgcgcccgctggcggccgaggtgctggtcgatggcggccaggcgcggctgattcgc
cgccgccagaccgtggacgacctgctggcgctggaaaccgggctgtaa
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