KEGG   Comamonas serinivorans: CCO03_07735
Entry
CCO03_07735       CDS       T04892                                 
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
cser  Comamonas serinivorans
Pathway
cser03420  Nucleotide excision repair
cser03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cser00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CCO03_07735
   03430 Mismatch repair
    CCO03_07735
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cser03400]
    CCO03_07735
Enzymes [BR:cser01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CCO03_07735
DNA repair and recombination proteins [BR:cser03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CCO03_07735
   MMR (mismatch excision repair)
    Other MMR factors
     CCO03_07735
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 PcrA_UvrD_tudor AAA_12 Viral_helicase1
Other DBs
NCBI-ProteinID: ARU06728
UniProt: A0A1Y0ET70
LinkDB
Position
1811705..1814218
AA seq 837 aa
MRRPGAVSISMTFDLFSSPEPTPSPAPSPLLDGLNAEQAAAVTLPDAHALILAGAGSGKT
RVLTTRIAWLLHMGRVSPGGILAVTFTNKAAREMQARLGAMLPLNIRGMWMGTFHGLCNR
MLRAHHQAAQLPATFQILDMQDQQSAIKRLIKQFGVDEERFPPKQVMWFINGCKEEGMRP
GDVSVRDEESRKKVELYQLYQDQCQREGVVDFAELLLRSYELLRDHAPIRDHYQRRFRHI
LVDEFQDTNRLQYLWLKQLAGTGSSVFAVGDDDQSIYAFRGARVGNMADFVREFDVQHQI
KLEENYRSHGHILDSANALIAHNTQRLGKNLRTAQGAGEPVRVFEAPSDLAEAAWLVDEM
KHLSRDDGVPLHEIAVLYRSNAQSRVIETALAQSGLAYRVYGGLRFFERAEIKHALAYLR
LLETPSDDTSFLRVVNFPARGIGARSIEALQTQARALGLPLYTAAKGMTGRAGTLLQSFV
ALIEVMREQAQGLSLREVVDLMLEQSGLVEHYRGERDGGDRIENLQELASAAEAFVRLEG
FHTDQAALPTTSEGVTLTQGLASQGLSGDALDQAMLESRDAPGGQPAPDYVDLDTGETLS
PLAAFLTHAALEAGDNQAQAGQDAVQLMTVHASKGLEFDVVFITGLEEGLFPHENSAADT
AGLEEERRLMYVAITRARQRLYLSHTQTRLLHGQSRYNFRSRFLDEVPSECVQWLTPKSG
GFGSGVGASLAHGGQYGRMPAWSKDSGFGRSASNAYPGQPAWSAPNLTNAPLERPPVQTS
AGQALRAGMQVFHNKFGEGKVLAVEGSGTDGKAQVSFTRHGTKWLSLAVAKLTVVET
NT seq 2514 nt   +upstreamnt  +downstreamnt
atgcgccgcccaggcgcggtttccatttccatgacctttgacctgttttcatcgccggaa
cccacgccgtctccggcgccatcgcctctgctggatgggctgaacgccgagcaggccgcc
gccgtcaccttgcccgatgcgcacgcgctgattttggccggcgccggttcgggcaagacg
cgcgtgctgaccacgcgcatcgcctggctgctgcacatgggccgcgtgtcgccaggcggc
atcctggccgtcaccttcaccaacaaggccgcgcgcgagatgcaggcgcgcctgggggcc
atgctgccgctcaacatccgcggcatgtggatggggaccttccacggcttgtgcaaccgc
atgctgcgcgcgcaccaccaggccgcgcagctgccggccacgttccagatcctggacatg
caggaccagcagtcggccatcaagcggctgatcaagcagtttggggtcgatgaggagcgc
tttccgcccaagcaggtgatgtggttcatcaacggctgcaaggaggagggcatgcggccg
ggcgatgtgtccgtgcgcgacgaggagtcgcgcaagaaggtcgagctctaccagctgtac
caggaccagtgtcagcgcgagggcgtggtggacttcgccgagctgctgctgcgcagctac
gagctgctgcgcgaccacgcgccgatccgcgaccattaccagcgtcggttccgccacatc
ctggtcgacgagtttcaggacaccaaccgcctgcagtacctctggctcaagcagctggcg
ggcacgggcagcagcgtgttcgccgtgggtgacgacgaccagagcatctacgcctttcgc
ggcgcgcgcgtgggcaacatggccgacttcgtgcgtgagttcgacgtgcagcaccagatc
aagctggaggagaactaccgcagccatggccacatcctggactcggccaatgcgctgatc
gcccacaacacccagcgcctgggcaagaacctgcgcacggcgcagggcgcgggcgagccc
gtgcgcgtgttcgaggcgcccagcgacctggccgaggcggcctggctggtggacgagatg
aagcacctgtcgcgcgacgatggcgtgcccttgcacgagatcgccgtgctttaccgcagc
aacgcgcaaagccgtgtcatcgaaacggcgctggcgcaatcggggctggcctatcgcgtg
tacgggggcttgcgctttttcgagcgggccgagatcaagcacgcgctggcctacctgcgt
ttgctggaaacgccgagcgacgacaccagttttttgcgcgtggtgaactttccggcgcgc
ggcatcggtgcacgcagcatcgaggccctgcagacgcaggcgcgggcgctggggctgccg
ctgtacacggcggccaagggcatgaccggccgggccggaacgctgctgcagtcgttcgtg
gccttgatcgaggtcatgcgcgagcaggcgcagggcctgtccctgcgcgaggtggtggac
ctgatgctggagcagagcggcctggtcgagcactaccgcggcgagcgcgatggcggcgac
cggatcgagaacctgcaggagttggcgtcggcggccgaggcgtttgtgcggctggaaggc
ttccacaccgaccaggcggcgctgccgaccacgtccgagggtgtgaccctgacgcagggc
ctggccagccagggcctcagcggcgacgcgttggatcaagcgatgctggaatcgcgcgat
gcgccgggcggccaacccgcgcccgactacgtcgacctggacaccggcgagacgctgtcg
ccgctggccgcgtttttgacgcatgccgcgctggaagctggtgacaaccaggcgcaggcg
gggcaggacgcggtgcagctgatgaccgtgcatgccagcaaggggctggagttcgacgtg
gtgttcatcacggggctggaagaggggctgtttccgcatgaaaacagtgccgccgacacg
gcggggctggaagaggagcggcgcctgatgtacgtcgccatcacgcgtgcacgccaacgg
ctgtacctgtcgcacacccagacgcgtttgctgcatggccagtcgcgctacaacttccgc
agccgcttcctcgacgaagtgcccagcgaatgcgtgcagtggctcacccccaagagcggc
gggttcgggtcgggcgtgggcgccagcctggcgcatggcggccagtacgggcgcatgccg
gcctggagcaaagacagcggtttcgggcgcagcgcctcgaatgcctacccgggccagccg
gcctggagcgcccccaacctgacgaatgcccccctggaacgcccgccggtgcagaccagc
gccgggcaggcgctgcgcgcgggcatgcaggtgttccacaacaagtttggcgaaggcaag
gtgctggcggtggagggcagcggcaccgatggcaaagcgcaggtcagcttcacgcgccat
ggcaccaaatggctgtcgctggccgtggccaagttgacggtggtggagacctga

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