KEGG   Comamonas serinivorans: CCO03_07780
Entry
CCO03_07780       CDS       T04892                                 
Name
(GenBank) RNA helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
cser  Comamonas serinivorans
Pathway
cser03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cser00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CCO03_07780
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cser03019]
    CCO03_07780
Enzymes [BR:cser01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     CCO03_07780
Messenger RNA biogenesis [BR:cser03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     CCO03_07780
SSDB
Motif
Pfam: DEAD Helicase_C ResIII P-loop_SecA HI1480 AAA_22 Utp25_C UvrD-helicase
Other DBs
NCBI-ProteinID: ARU06729
UniProt: A0A1Y0ETT6
LinkDB
Position
complement(1824272..1826248)
AA seq 658 aa
MTFDDLNLAPAILDAVRDMGYDAPTPIQAQAIPLVLEGHDLLAGAQTGTGKTAAFALPLL
NKLSQQAAGKSKFGGKAVRALVLTPTRELAAQIDDNVRAYCKNLPQLNSTVIFGGVGMKP
QIDRLAKGVDVLVATPGRLLDLQDQGYLDLSTVEILVLDEADRMLDMGFIHDVKKVLKLL
PKDKQSLLFSATFSNEIRELANGLLHSPKSIQVTPPNTTVQRITQLIHPVGRGKKKAALL
SIIEQHNWSQVLVFTRTKYGANSVAEYLTKNGVQAMALHGNKSQTARTQALAGFKSGELR
ALVATDIAARGIDIEDLPHVVNYEIPNVPEDYVHRIGRTGRAGADGHAVSLVCMDEEGFM
MEIERFTKQEIPAQMLDGFGPEEGERAEPIAMGRQTLWGGLGKPPSRDVMAAAAKAARQE
MMQRIRDNKATQGQKPKRADGDAEADGQRPARGNAQRPARGNAGQAASADGRPGQGHNRS
RRRGNGAGGSAAPRADFQERVDGEAGHAPMREPRADGEGGGRNRRSRAPYGQDRNDGQRA
QPRERADFDEDYDPDLERLPRNVDPLQTNLHNRRSNGVRRPAAPGSQPDPMRTSIDAMGA
GKRYGGGGGAGGNRGGNHFGGGAGNGGGRGRSRSRSGGGGGGGSSNGGGNGWRSLNGR
NT seq 1977 nt   +upstreamnt  +downstreamnt
atgacatttgatgatttgaatctggcgccagccatcctggacgccgtgcgcgacatgggc
tacgacgccccgactccgattcaagcgcaagccattcccctggttctggaaggccatgat
ctgctggccggcgcccagaccggcaccggcaaaacagccgccttcgccctgcccttgctg
aacaagctgagccagcaagccgccggcaagagcaaattcggcggcaaggccgtgcgcgcc
ctggtgctgacccccacgcgcgagctggccgcacagatcgacgacaacgtccgcgcctat
tgcaagaacctgccccagctgaactccaccgtgatcttcggcggcgtgggcatgaagccg
cagatcgaccgcctcgccaagggcgtggacgtgctggtggccacaccgggtcgcctgctc
gacctgcaggaccagggctacctcgacctgtccacggtcgaaatcctggtgctggacgaa
gccgaccgcatgctggacatgggcttcatccacgacgtgaagaaggtgctcaagctgctg
cccaaggacaagcaaagcctgctgttctcggccaccttcagcaacgagatccgcgagctg
gccaacggcctgctgcactcgcccaagagcatccaggtgacgccgcccaacacgacggtg
cagcgcatcacgcagctcatccacccggtgggccgcggcaagaaaaaggctgccttgctg
tccatcatcgagcagcacaactggagccaggtgctggtcttcacgcgcaccaagtacggt
gccaacagcgtggccgagtacctgaccaagaacggcgtacaggccatggccttgcacggc
aacaagagccagaccgcccgcacgcaggccctggccggcttcaagagcggtgagttgcgc
gcgctggtggcgaccgacatcgccgcccgtggcatcgacatcgaagacctgccgcacgtc
gtgaactacgaaattcccaacgtgccggaagactacgtgcaccgcatcggccgcaccggc
cgcgccggcgccgatggacacgccgtgagcttggtctgcatggacgaagaaggcttcatg
atggagatcgaacgcttcaccaagcaggagatccccgcccagatgctcgacggcttcggc
cccgaagaaggcgagcgcgccgaacccatcgccatgggacgccagaccctgtggggcggc
ctgggcaagccgcccagccgcgacgtgatggccgctgccgccaaggccgcgcgccaggaa
atgatgcagcgcatccgcgacaacaaggccacgcaagggcaaaagcccaagcgtgccgat
ggcgacgcggaagccgacggccagcgcccggcacgcggcaacgcccaacgcccggcgcgt
ggcaatgccggccaggctgccagcgccgatggccgtccgggccagggccacaaccgcagc
cgccgccgcggcaatggtgccggcggcagcgcggcaccgcgcgccgacttccaggagcgc
gttgatggcgaagccggccacgcaccgatgcgcgagcctcgcgccgatggcgagggcggc
ggtcgcaaccgccgcagccgcgcgccctatggccaggaccgcaacgacggtcagcgcgcc
cagccccgtgaacgcgccgacttcgacgaggactacgatcccgatctggaacgcctgcca
cgcaacgtcgacccgttgcaaaccaacctgcacaaccgccgcagcaacggcgtgcgccgt
ccggccgcgccgggttcgcagccggatccgatgcgcaccagcatcgatgccatgggcgcc
ggcaagcgctatggcggcggcggcggtgccggcggcaaccgtggcggcaaccacttcggt
ggcggcgcgggcaatggcggcggccgtggccgcagccgttcgcgcagtggcggtggtggt
ggcggcggaagcagcaacggcggcggcaacggctggcgttcgctcaacggccgctga

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