Entry |
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Name |
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KO |
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Organism |
cser Comamonas serinivorans
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:cser00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CCO03_07780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:cser03019]
CCO03_07780
Enzymes [BR:cser01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CCO03_07780
Messenger RNA biogenesis [BR:cser03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CCO03_07780
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
complement(1824272..1826248)
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AA seq |
658 aa
MTFDDLNLAPAILDAVRDMGYDAPTPIQAQAIPLVLEGHDLLAGAQTGTGKTAAFALPLL
NKLSQQAAGKSKFGGKAVRALVLTPTRELAAQIDDNVRAYCKNLPQLNSTVIFGGVGMKP
QIDRLAKGVDVLVATPGRLLDLQDQGYLDLSTVEILVLDEADRMLDMGFIHDVKKVLKLL
PKDKQSLLFSATFSNEIRELANGLLHSPKSIQVTPPNTTVQRITQLIHPVGRGKKKAALL
SIIEQHNWSQVLVFTRTKYGANSVAEYLTKNGVQAMALHGNKSQTARTQALAGFKSGELR
ALVATDIAARGIDIEDLPHVVNYEIPNVPEDYVHRIGRTGRAGADGHAVSLVCMDEEGFM
MEIERFTKQEIPAQMLDGFGPEEGERAEPIAMGRQTLWGGLGKPPSRDVMAAAAKAARQE
MMQRIRDNKATQGQKPKRADGDAEADGQRPARGNAQRPARGNAGQAASADGRPGQGHNRS
RRRGNGAGGSAAPRADFQERVDGEAGHAPMREPRADGEGGGRNRRSRAPYGQDRNDGQRA
QPRERADFDEDYDPDLERLPRNVDPLQTNLHNRRSNGVRRPAAPGSQPDPMRTSIDAMGA
GKRYGGGGGAGGNRGGNHFGGGAGNGGGRGRSRSRSGGGGGGGSSNGGGNGWRSLNGR |
NT seq |
1977 nt +upstreamnt +downstreamnt
atgacatttgatgatttgaatctggcgccagccatcctggacgccgtgcgcgacatgggc
tacgacgccccgactccgattcaagcgcaagccattcccctggttctggaaggccatgat
ctgctggccggcgcccagaccggcaccggcaaaacagccgccttcgccctgcccttgctg
aacaagctgagccagcaagccgccggcaagagcaaattcggcggcaaggccgtgcgcgcc
ctggtgctgacccccacgcgcgagctggccgcacagatcgacgacaacgtccgcgcctat
tgcaagaacctgccccagctgaactccaccgtgatcttcggcggcgtgggcatgaagccg
cagatcgaccgcctcgccaagggcgtggacgtgctggtggccacaccgggtcgcctgctc
gacctgcaggaccagggctacctcgacctgtccacggtcgaaatcctggtgctggacgaa
gccgaccgcatgctggacatgggcttcatccacgacgtgaagaaggtgctcaagctgctg
cccaaggacaagcaaagcctgctgttctcggccaccttcagcaacgagatccgcgagctg
gccaacggcctgctgcactcgcccaagagcatccaggtgacgccgcccaacacgacggtg
cagcgcatcacgcagctcatccacccggtgggccgcggcaagaaaaaggctgccttgctg
tccatcatcgagcagcacaactggagccaggtgctggtcttcacgcgcaccaagtacggt
gccaacagcgtggccgagtacctgaccaagaacggcgtacaggccatggccttgcacggc
aacaagagccagaccgcccgcacgcaggccctggccggcttcaagagcggtgagttgcgc
gcgctggtggcgaccgacatcgccgcccgtggcatcgacatcgaagacctgccgcacgtc
gtgaactacgaaattcccaacgtgccggaagactacgtgcaccgcatcggccgcaccggc
cgcgccggcgccgatggacacgccgtgagcttggtctgcatggacgaagaaggcttcatg
atggagatcgaacgcttcaccaagcaggagatccccgcccagatgctcgacggcttcggc
cccgaagaaggcgagcgcgccgaacccatcgccatgggacgccagaccctgtggggcggc
ctgggcaagccgcccagccgcgacgtgatggccgctgccgccaaggccgcgcgccaggaa
atgatgcagcgcatccgcgacaacaaggccacgcaagggcaaaagcccaagcgtgccgat
ggcgacgcggaagccgacggccagcgcccggcacgcggcaacgcccaacgcccggcgcgt
ggcaatgccggccaggctgccagcgccgatggccgtccgggccagggccacaaccgcagc
cgccgccgcggcaatggtgccggcggcagcgcggcaccgcgcgccgacttccaggagcgc
gttgatggcgaagccggccacgcaccgatgcgcgagcctcgcgccgatggcgagggcggc
ggtcgcaaccgccgcagccgcgcgccctatggccaggaccgcaacgacggtcagcgcgcc
cagccccgtgaacgcgccgacttcgacgaggactacgatcccgatctggaacgcctgcca
cgcaacgtcgacccgttgcaaaccaacctgcacaaccgccgcagcaacggcgtgcgccgt
ccggccgcgccgggttcgcagccggatccgatgcgcaccagcatcgatgccatgggcgcc
ggcaagcgctatggcggcggcggcggtgccggcggcaaccgtggcggcaaccacttcggt
ggcggcgcgggcaatggcggcggccgtggccgcagccgttcgcgcagtggcggtggtggt
ggcggcggaagcagcaacggcggcggcaacggctggcgttcgctcaacggccgctga |