Comamonas serinivorans: CCO03_09525
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Entry
CCO03_09525 CDS
T04892
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
cser
Comamonas serinivorans
Brite
KEGG Orthology (KO) [BR:
cser00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
CCO03_09525
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
HHH_7
S1_RRP5
YqgF
T2SSK
HHH_6
DUF460
DUF3016
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
ARU04888
UniProt:
A0A1Y0EN88
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Position
2227762..2230221
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AA seq
819 aa
AA seq
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MHSITAQIAQELKVREEQVQAAVGLLDGGATVPFVARYRKEVTGGLDDVQLRELDARLAY
LRELADRRAAVLKSIDEQGKLTPALRAAIERAATKQDVEDLYLPYKPKRRTKGQIAREFG
IEPLADALLADPSQDPQTAAVPFVKAEKGEGGEDFTTVAAVLDGVRDILAERWAEDAQLV
QTLREWLWQEGLLVSKLAAGKDEHNPEVAKFRDYFDYDEPIGRVPSHRALAVFRGRAQEI
LDAKLTLPEAAEAPGGASERGALNLAEGRIALHVGWRHQGRAADDLLKKAVSWTWRVKLS
LSTERDLFARLRDAAETVAIKVFADNLRDLLLAAPAGQRTVLGLDPGIRTGVKVAVCDAT
GKLVDTTTVYPHEPRRDWEGSVHTLAKLCVKHGVQLIAIGNGTASRETDKLAGDVIKLVE
KMMPPRPLAAPGPLPPEGAAFGLGGGPAAKLAGDSFVKIEKIVVSEAGASVYSASEYASQ
ELPDVDVSLRGAASIARRLQDPLAELVKIDPKSIGVGQYQHDVNQSELARTLDAVVEDCV
NGVGVDLNTASVPLLTRVSGLSGSVAKAVVRWREANGAFRSRQQLLEVSGLGAKTFEQSA
GFLRIRGGDNPLDMTAVHPESYAVVDRILAQAGKPVDQVMGRSDVLKALRPELFANDTVG
VITVQDILAELDKPGRDPRPDFQVARFNDGVEDIADLQPGMVLEGTVSNVAAFGAFVDLG
VHQDGLVHVSQLANKFVEDAREIVKTGQIVKVKVLEVDAARKRISLTMKLDAQAPRRDGP
RENRFESAGRGQRAGQARRDAPQATAMASAFSKLQGLKR
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgcacagcatcaccgcgcagatcgcacaggaactcaaggtcagggaagagcaggtgcaa
gccgctgtgggcttgctcgatggcggggcgaccgtgcccttcgtggcgcgttaccgcaaa
gaagtcaccggcggcctggacgatgtgcagctgcgcgaactcgacgcccgcctggcctac
ctgcgtgagttggccgaccgccgggctgccgtgctcaagagcatcgacgagcagggcaag
ctgacacccgcgttgcgcgcggcgatcgagcgcgccgccaccaagcaggacgtggaagac
ctgtacctgccctacaagcccaagcgccgcaccaaaggccagatcgcgcgcgagttcggc
atcgagcccctggccgatgcgctgctggccgacccctcacaggacccgcagaccgctgcc
gtgccgttcgtgaaggccgagaaaggcgaaggcggcgaagatttcaccaccgtggccgcc
gtgctcgatggcgtgcgcgacatcctggccgagcgttgggccgaggacgcgcagctcgtg
cagacgctgcgcgaatggctgtggcaagaaggcctgctggtgtccaaactggcggcgggc
aaggacgagcacaaccccgaagtcgccaagttccgcgattacttcgactacgacgagccc
attgggcgcgtgccttcacaccgcgcgctggctgttttccgcggtcgcgcgcaagagatc
ctggatgccaagctcacgctgcctgaggccgccgaagccccgggcggcgcgagcgagcgc
ggcgccctcaacctggcggaagggcgcatcgccctgcatgtgggctggcgccaccagggc
cgcgcggccgacgacctgctgaaaaaagccgtgagctggacctggcgcgtcaagctcagc
ctgtcgaccgagcgcgacctgtttgcgcgtctgcgtgacgcggccgaaacggtggcgatc
aaggtgttcgccgacaacctgcgcgatttgttgctggccgcgccggccggccagcgcacc
gtgctggggctggaccccggcatccgcaccggggtgaaggtggccgtgtgcgacgcgacc
ggcaagctggtcgacaccaccacggtgtacccgcacgagccgcgccgcgactgggagggc
agcgtgcacacgctggccaagctgtgcgtcaagcacggggtgcagctgatcgcgatcggc
aacggcaccgccagccgcgagacggacaagctggccggcgacgtgatcaagctggtcgaa
aaaatgatgcccccacgccccctggctgcgcctggtccgctgcccccagagggagcagcg
tttggccttgggggcggccctgcggccaaactggccggtgattcgtttgtcaagatcgag
aagatcgtggtcagcgaagcgggcgcttcggtctacagcgccagcgagtacgcgtcgcag
gagctgcccgatgtggacgtgagcctgcgtggcgccgccagcatcgcgcgccgcctgcag
gacccgctggccgagctggtcaagatcgaccccaagagcattggcgtggggcagtaccag
cacgacgtcaaccagagcgagctggcgcggacgctggacgccgtggtggaagactgcgtg
aacggcgtcggggtggacctgaacaccgccagcgtgcccttgctcacgcgcgtgtccggc
ctgtcgggcagcgtggccaaggcggtggtgcgctggcgcgaggccaacggcgccttccga
agccgccagcagttgctggaggtgagcggcctgggcgccaagaccttcgagcagagcgcc
ggcttcctgcgcatccgcggcggcgacaacccgctggacatgaccgcggtgcacccggaa
agctacgccgtggtcgaccgcatcctggcgcaggcgggcaagcccgtcgaccaggtgatg
gggcgcagcgacgtgctcaaggccctgcgccccgagctgttcgccaacgacaccgtgggc
gtcatcaccgtccaggacatcctggccgagctggacaagcctgggcgcgacccacggccc
gacttccaggtggcgcgcttcaacgacggggtcgaagacatcgcggacctgcagcccggc
atggtgctggaaggcaccgtgagcaacgtggccgcctttggcgccttcgtggacctgggc
gtgcaccaggacggcctggtgcacgtgagccaactggccaacaagttcgtcgaggatgcg
cgcgaaatcgtcaagaccggccagatcgtcaaggtcaaggtgctcgaagtcgacgcggcg
cgcaagcgcatcagcctgacgatgaagctggacgcgcaggcgccgcggcgcgatggcccg
cgcgagaaccggtttgaaagcgccggccgcggccagcgtgcggggcaggctcggcgcgat
gcgccgcaagccacggccatggcctcggccttcagcaagctgcagggcttgaagcgttga
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