Comamonas serinivorans: CCO03_09735
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Entry
CCO03_09735 CDS
T04892
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
cser
Comamonas serinivorans
Pathway
cser03030
DNA replication
cser03430
Mismatch repair
cser03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cser00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CCO03_09735
03430 Mismatch repair
CCO03_09735
03440 Homologous recombination
CCO03_09735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cser03032
]
CCO03_09735
03400 DNA repair and recombination proteins [BR:
cser03400
]
CCO03_09735
Enzymes [BR:
cser01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CCO03_09735
DNA replication proteins [BR:
cser03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CCO03_09735
DNA repair and recombination proteins [BR:
cser03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CCO03_09735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
AAA_22
RuvB_N
AAA_18
AAA_14
AAA_19
AAA_2
AAA_5
AAA_assoc_2
Herpes_Helicase
SKI
TsaE
Rad17
nSTAND3
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ARU04925
UniProt:
A0A1Y0EMP1
LinkDB
All DBs
Position
2277770..2280202
Genome browser
AA seq
810 aa
AA seq
DB search
MSYLVLARKYRPRNFREMVGQAHVVTALGNALVQKRLHHAYLFTGTRGVGKTTVSRILAK
SLNCVGVDGQGDITAEPCGVCEACRAIDAGNFVDYTELDAASNRGVDEVQQLLEQAVYKP
VQGRFKVFMIDEVHMLTNTAFNAMLKTLEEPPEYLKFVLATTDPQKVPVTVLSRCLQFNL
RPMAPETVREHLAAVLGNEQIQAEPGALTLLSRAARGSMRDALSLTDQAIAFGAGQVQEA
TVRQMLGAVDRQQVFAIIEALAAGDGQAVVGLVEQARAVGLNAGSLLEDMAQVLQHMAVA
QTVRTAEPPADADPDQRMEHQLAQQMARDETQLLYSICIHGRAELGLAPDEYAGLTMVLL
RLLAFQPEGAEKKTPESGRLTKQALPAEASASSAGRAPGATAPPAVVQGLAPAPVPAAAP
TLAKPVATSAAAAMPVRVPPAAPLVVGDRGQSGSTGPSMPVDVVVGRSMVQSPLMQQTRV
LDTPYISVALDGQGAAPTPDSMASQPPEVPHPVPDRAEPPPVEQAAQTPPWREAAAPVVP
VVPPGHAVPEIATLRPEQAHELDEHRAPEPAPLAIAATVELDQPSTSLDDEQDDLGPPSM
PPWDELVELDAAPPVMAPAAKPLAPGAGAALQALPVRDAPQGGTPDPLPADDAPHPVLSV
PVARASRDEVPTGQAKALPPLVPTEEGKFWHRVVAGLVGQEAINGFVRELALQSQLLQRD
ADAWHLACASGLLGSANTVERLQAALVAAGHAVQLKVRQAEVSDTPSLRNQHAQARRLNA
ARALLEADPFVQALQRDFAATIIDHSVKPL
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatctggtcctggcccgcaaatatcgcccgcgcaacttccgcgaaatggtgggg
caggcccatgtggtgacggcactgggtaacgcgctggtgcaaaagcgcctgcaccacgct
tacctgttcacgggcacgcgaggtgtgggcaagaccacggtgtcgcgcatcctggccaag
tcgctcaactgcgtgggcgtggatgggcagggcgacatcacggccgaaccgtgtggcgtg
tgcgaggcctgccgcgccatcgatgcgggcaatttcgtcgattacaccgagctggacgcg
gcctcgaaccggggcgtggacgaggtgcagcagctgctcgaacaggctgtttacaagccg
gtgcagggccgcttcaaggtcttcatgatcgacgaagtgcacatgctgacgaacacggcc
ttcaacgccatgttgaagacgctggaggagccgcccgagtacctgaaattcgtgctggcg
acgaccgacccgcaaaaggtgccggtcaccgtgctcagccgctgtctgcagttcaacctg
cggcccatggcccccgaaacggtgcgcgagcacctggcggccgtgctgggcaacgaacag
atccaggccgagccaggggcgctgacgctgctgtcacgcgcagcgcggggttcgatgcgc
gacgcgctgtcgctcaccgaccaggcaattgcctttggcgccggccaggtccaggaagcg
acggtgcggcagatgctgggcgccgtcgatcgtcagcaggtgttcgccatcatcgaggcc
ttggcggcgggcgatggtcaggcggtcgtggggctggtcgaacaggcccgggccgtgggg
ctgaatgccggcagcctgctcgaggacatggcccaggtgttgcagcacatggcggtggct
cagaccgtgcgcacggccgagccgcccgccgatgccgatccggatcagcgcatggagcac
cagctggcgcaacagatggcgcgggatgaaacgcagctgctctacagcatctgcatccat
ggccgagccgaactgggtttggcgcccgacgagtatgcgggcctgaccatggtgttgctc
cggcttctggccttccagccagaaggggctgaaaaaaaaacgcctgaatccgggcgcctg
accaagcaggcgctgcctgccgaggcgtccgcgtcgtctgctggccgcgcgccaggggcc
accgcgccgccggcggtggtgcaggggctcgcaccggcacctgtcccggctgcggcaccg
acgttggccaagcccgtggcaacgtcggcggcggctgccatgccggtgcgcgtgccgccc
gcggcgccgcttgtcgttggcgacagggggcagtccggatcgacagggcccagcatgccg
gttgatgtggtggtcgggcggagtatggtgcaatctccgttgatgcaacaaacgagagtg
ctcgataccccttatatttcggttgcattggacgggcagggcgctgctcccacgccggat
tcgatggcgtcgcaaccgcccgaggtgccgcaccccgttccagaccgggccgagcccccg
cccgtggagcaggctgcccagacgcccccgtggcgcgaggctgcggcgccggtagtgccg
gtagtgccgccgggtcacgcggtgcccgagatcgccacgctgcggcctgagcaggcccac
gagctggacgaacaccgtgcgccggagccagcgccgctcgccatcgcagcaacggtcgag
ctggaccagccatcgacgtccctcgatgatgagcaggacgacctgggcccgccgtcaatg
cccccctgggacgagctggtggagctggatgcggcaccgcccgtgatggcgccggcagcc
aagccgcttgcgccgggtgctggggccgcgctgcaagccttgccggtgcgcgatgcgccg
cagggcggcacccccgacccgctgcctgcggacgacgcgccgcacccggtgctgtctgtg
ccggtggcccgcgcgtcgcgcgacgaggtgcccacgggccaggccaaggcattgccgccg
ctggtgcccaccgaagagggcaagttctggcaccgcgtggtggctggcttggtgggccag
gaggccatcaacgggttcgtgcgcgagctggcgttgcagtcacagctgctgcagcgcgat
gcggatgcctggcatctggcgtgtgcctcgggcctgctgggcagcgccaacacggtggag
cgcctgcaggccgcgctggtggcagccggccatgccgtgcagttgaaggtcaggcaggcc
gaggtttccgacacgccgtcgctgcgcaatcagcatgcgcaggccaggcggctgaacgcc
gcgcgcgcgctgctcgaggccgatccgttcgtgcaggcgctgcagcgcgacttcgcggcg
acaatcatcgatcacagcgtcaagcccttgtga
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