KEGG   Comamonas serinivorans: CCO03_10255
Entry
CCO03_10255       CDS       T04892                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
cser  Comamonas serinivorans
Pathway
cser03030  DNA replication
cser03410  Base excision repair
cser03420  Nucleotide excision repair
cser03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cser00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CCO03_10255
   03410 Base excision repair
    CCO03_10255
   03420 Nucleotide excision repair
    CCO03_10255
   03440 Homologous recombination
    CCO03_10255
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cser03032]
    CCO03_10255
   03400 DNA repair and recombination proteins [BR:cser03400]
    CCO03_10255
Enzymes [BR:cser01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CCO03_10255
DNA replication proteins [BR:cser03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     CCO03_10255
DNA repair and recombination proteins [BR:cser03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     CCO03_10255
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CCO03_10255
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 HHH_5
Other DBs
NCBI-ProteinID: ARU05016
UniProt: A0A1Y0EN47
LinkDB
Position
2411194..2414034
AA seq 946 aa
MTQTQEPAGGHALSGQTLLLVDGSSYLYRAYHAMPDLRADPLDPTSPPTGAIRGMINMLG
SLRQDFPEAQYVACVFDASGKTFRDDLYAAYKANRSPMPDDLRAQIEPINTVVQLLGWTV
LTIPGIEADDVIGTLARAGEARGMQVVISSGDKDLAQLVTEHVTIIDTMSGKKRDLAGVQ
AEFGVPANRMIDYQTLVGDSVDNVPGVSKVGPKTAAKWLNEYGSLDALIAQADAVKGAAG
ENLRKALDWLPTGRQLVTIRTDCDLSPALNAQATGTATVDDPIHALPVRPADAAALAQFY
EQYGFRSLAKSIAAGHTTLGGAGKGGRAKAGPAPETDLPAGKSEVGELRYTTILTWAQFD
EWLARIDAAELTALDTEATSLDEMQATLVGISLSVQPGEAAYIPLMHTQPGTPEQLPLDE
VLARLKPWLEDASKPKLGQNFKYDRHVFANHGMTVRGYVHDTMLASYVLEVHRAHSLESL
ADRHLGRTGLSYEDVCGKGVNQIPFAEVDLDTATRYACEDADQTLDVHRALWPRLAADER
LRGIYALEIETSERLFRVERNGVQIDAGTLARQSNDLGRRILEAEEKAYELAGQPFKLGS
PKQIGEILFGKLGIPPLKKTPSGVPSTDEDVLEQLAEDYPLPATILEHRSLSKLKSTYTD
KLPQMASPLDGRVHTHYAQAVAVTGRLSSVDPNLQNIPVRTADGRRIREAFVAPPGRLIA
SADYSQIELRIMAHLSGDAALLKAFREGLDVHRATASEVFGVAPDQVSSEQRRYAKVINF
GLIYGMSAFGLAKNLNIERSAAKSWIERYFERYPGVRRYMDDTVDFARSHGYVETVFGRR
LYLPEINGGNGPRKRAAERQAINAPMQGTAADLIKKAMCAVQDKLDAQGRQTLIIMQVHD
ELVFEVPEAEVDWVREEVPQLMASVAELQVPLLAEVGVGLNWEEAH
NT seq 2841 nt   +upstreamnt  +downstreamnt
atgacccaaacccaagaacctgccggcgggcacgccctgtccggtcagaccctgctgctg
gtcgatggctccagctacctgtaccgcgcctaccacgccatgcccgatctgcgggccgat
ccgctggacccgaccagcccgcccaccggggccatccgcggcatgatcaacatgctgggc
agcttgcgccaggacttccccgaggcccagtacgtggcttgcgttttcgacgccagcggc
aagaccttccgcgacgacctctacgccgcgtacaaggccaaccgctctcccatgccggac
gacctgcgcgcccagatcgagcccatcaacaccgtggtgcagctgctgggctggacggtg
ttgaccatcccgggcatcgaggccgacgacgtgatcggcacgctggcccgcgccggcgag
gcgcgcggcatgcaggtcgtcatctccagcggtgacaaggacctggcgcagctggtgacc
gagcacgtcaccatcatcgacaccatgagcggcaagaagcgcgacctggccggtgtgcag
gccgagttcggggtgccggccaaccgcatgatcgattaccagacgctggtgggcgacagc
gtggacaacgtgccgggcgtcagcaaggtggggcccaagacggcggccaagtggctgaac
gaatacggttcgctggatgccctcatcgcccaggccgatgcggtgaaaggtgccgcgggc
gaaaacctgcgcaaggccctggactggctgccgacagggcggcagctcgtcaccatccgc
accgattgcgacctgagcccggccttgaacgcgcaggccacgggcaccgccaccgtggat
gaccccatccatgccttgccggtgcgcccggccgatgccgcggcgctcgcgcagttctac
gagcagtacggatttcgctcgttggccaaatcgatcgcagcgggccataccaccttgggt
ggtgccggcaagggcggccgcgccaaggcgggccccgcacccgagaccgacttgccggcg
ggcaagtccgaagtgggcgagctgcgctacaccaccatcctgacctgggcgcagttcgac
gagtggctggcacgcatcgacgcggccgagttgacggcgctggacaccgaggccacctcg
ctcgacgaaatgcaggccacgctggtgggcatcagcctcagcgtgcagcccggcgaagcg
gcctacatcccgttgatgcacacccaacccggcacgcctgagcaactgccgctggacgag
gtgctggcccgcctgaagccctggctggaagacgcgagcaagcccaagctggggcagaac
ttcaaatacgaccgccacgtcttcgccaaccatggcatgacggtgcgcggctatgtgcac
gacaccatgctcgccagctacgtgctcgaggtgcaccgggcccacagcctggaaagcctg
gccgaccggcacctgggccgcaccggcctgagctatgaggacgtgtgcggcaaaggggtg
aaccagatcccgtttgccgaggtggacctggacaccgccacgcgatacgcctgcgaagac
gccgaccagaccctggatgtgcaccgcgcgctgtggccccgcctggccgcggacgagcgg
ctgcgcggcatttacgcgctggaaatcgagaccagcgagcgcctgttccgcgtcgaacgc
aacggcgtgcagatcgacgccggtacgctggcccggcagagcaacgacctggggcgccgc
atcctggaggccgaagagaaggcctacgagctggccggccagcccttcaagctgggcagc
ccgaaacagatcggcgagatcctgttcggcaagctcggcattccgcccttgaagaagacc
cccagcggcgtgcccagcaccgacgaagacgtgctggagcaactcgccgaggactacccg
ctgcccgccaccatcttggagcaccgcagcctgtccaagctcaagagcacctacaccgac
aagctgccgcagatggcctcgccgctggacggccgcgtgcacacccactacgcccaggcg
gtggcggtgacaggccgcctgtccagcgtggaccccaacctgcagaacatccccgtgcgc
acggccgatggccgccgcatccgcgaagcctttgtcgcgccgccgggccgcctgatcgcc
agcgccgattacagccagatcgagctgcgcatcatggcgcacctgtcgggtgacgcggct
ttgctgaaggccttccgcgagggcctggacgtgcaccgcgccacggcgtccgaggtgttt
ggcgtcgcgcccgaccaggtcagcagcgaacagcgccgctatgccaaggtcatcaacttc
gggctgatctacggcatgagcgcctttggcttggccaagaacctgaacatcgagcgctcg
gccgccaagtcttggatcgagcgctacttcgagcgctaccccggcgtgcgccgctacatg
gacgacaccgtggacttcgcgcgttcgcacggctacgtggaaaccgtgtttggccggcgc
ctgtacctgcccgaaatcaacggcggcaacggcccccgcaaacgcgccgccgagcgccag
gccatcaacgcgcccatgcagggcacggccgccgacctgatcaagaaagccatgtgcgcc
gtccaggacaagctggacgcacaagggcgccagacgctgatcatcatgcaggtgcacgac
gaactggtgttcgaggtgcccgaggccgaagtcgactgggtgcgcgaggaggtgccgcag
ctcatggccagcgtggccgagctgcaggtgccgctgctggccgaagtgggcgtgggcctg
aactgggaagaggcgcactga

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