Comamonas serinivorans: CCO03_11445
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Entry
CCO03_11445 CDS
T04892
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
cser
Comamonas serinivorans
Pathway
cser03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cser00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CCO03_11445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cser03400
]
CCO03_11445
Enzymes [BR:
cser01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CCO03_11445
DNA repair and recombination proteins [BR:
cser03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CCO03_11445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
AAA_22
Viral_helicase1
SH3_13
RecD_N
nSTAND3
T2SSE
Helicase_RecD
NTPase_1
UvrD-helicase
AAA_28
SLFN-g3_helicase
AAA_16
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ARU06804
UniProt:
A0A1Y0ET04
LinkDB
All DBs
Position
complement(2700957..2703188)
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AA seq
743 aa
AA seq
DB search
MSDATTAGHRPRAADLPALATSGNDAVPGAVDAVQHAAGLSAGSVPGDAVGGAAPLQGAG
PAGQAANPVATPMDALHGVTLAEWQAQLAASSQVMAGEGASPLVLRGPRLYLRRTWQDEQ
TVRAAIAARVGSPAARAQRDAWAPAQWRAALSALFPAPADDDGAMDWQQAACAMAASQGF
CIITGGPGTGKTTTVVKLLALLQAMALTGVGAGAVAEGLAPLAGRSAGTPLRIALAAPTG
KAAARLGESISGALARLDVQGLAMAMQSMQPSSFFDEREVVDTPSNLSEAPSAQTLLAAI
PTGAQTLHRLLGPRADSRHFWHHAHRPLPVDVLVVDEASMVDLDMMARLMQALPPQARLV
LLGDKDQLASVEAGAVLGELCSRAVKGHFSAATADWLQAVTGRSVPRDLQDANGTALDQA
VVMLRQSHRFGADSGIGQLAAAVNAGEPRAVRALRQRRLRDLQWLAVTQPQAPALAQLVL
NGQGAGLVAEPQPGAPSSAARLARPQGHGHYLSVMRAGEAAWRARAQQVGVAPDDAALDA
WALSVLQAQRQFQLLCALRQGAWGVEGLNRRIARWAMNAGLVQVQGSWWAGRPVMVTAND
YGLGLMNGDIGVTLARPVAGRSAVSELGTRLSVAFAAPDRPGGVRWVSPSRLTQVDTVFA
MTVHKSQGSEFTHAALVIPPAWNPVLTRELVYTGITRASHWCSLVLAGAHGEEVLELAVK
RRVLRASGLLADALEGSRHESRA
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatgcgaccacggccggccaccgcccacgcgccgctgatctgccggcgcttgcc
acgtccggcaacgacgcggtgcccggcgcggtggatgcggtgcagcacgccgccgggctt
tcggctggcagcgtgccgggtgatgcggtgggtggcgcggcgcccttacaaggcgcaggt
ccggccgggcaggccgcaaacccggttgccacgcccatggacgccctgcacggcgtgacc
ctggccgaatggcaggcacagctcgccgccagcagccaggtgatggcgggcgagggggca
tcgccgctggtgctgcgcgggccgcgcctgtacctgcgccgcacctggcaggacgaacag
accgtgcgcgccgccatcgccgcccgcgtgggcagccccgcggcccgggcccagcgcgat
gcctgggcgccagcccagtggcgcgccgcgctgtcggccctgtttcccgcgcccgcggac
gacgacggcgccatggactggcagcaagccgcctgtgccatggcggcctcgcagggcttt
tgcatcatcacgggggggccaggcaccggcaaaaccaccaccgtggtgaagttgctggcc
ttgctgcaggccatggcgctgaccggtgtgggtgccggcgcggtggccgagggcttggcc
ccgctggctggccggtcggccggcacgccgctgcgcatcgcgctggccgcccccacgggc
aaggccgcggcgcgcctgggcgagtccatcagcggcgcgctggcacggctcgatgtgcag
ggtctggccatggccatgcagagtatgcagccatcctcgttttttgatgaacgggaagtg
gttgataccccttcaaacttgagcgaggcacccagcgcacagaccttgctcgcggccatc
cccaccggggcgcagaccctgcaccgcctgctggggccgcgggccgacagccggcatttc
tggcaccacgcgcaccggccgctgccggtggacgtgctggtggtggacgaggcctccatg
gtcgacctggacatgatggcgcggctgatgcaggcgctgcccccgcaggcccgcctggtg
ctgctgggcgacaaggaccagctcgcgtcggtcgaggccggggccgtgctgggcgaactc
tgcagccgcgcggtgaaggggcatttcagcgccgccaccgcggactggctgcaggccgtg
accgggcgcagcgtgccgcgtgacctgcaggacgccaacggcaccgcgctggaccaggct
gtggtcatgctgcgccagagccaccgctttggcgccgattcgggcatcggccaactggcg
gccgccgtgaacgcgggcgagccgcgcgcggtgcgggcgctgcgccagcgccgcctgcgc
gacctgcagtggctggccgtgacccagccgcaggcaccggccctcgcgcagctggtgctc
aacgggcagggcgccggccttgtggccgagccgcaacccggcgcgccttcgtcagcggcc
cgtctggcgcgcccgcaaggccacggccactacctgagcgtgatgcgcgcgggcgaagcc
gcctggcgcgcgcgcgcccagcaggtgggcgtggcgcccgacgatgccgcgctggacgcc
tgggcgctgtcggtgctgcaggcccagcgccagttccagctgctgtgcgctttgcgccag
ggcgcctggggcgtggagggcttgaaccgccgcatcgcccgctgggccatgaacgccggc
ctggtgcaggtgcagggcagctggtgggccgggcgcccggtgatggtgacggccaacgac
tatggcctggggctgatgaatggcgacatcggcgtgaccctggcgcggccggtggccggg
cgctcagcggtgagcgaactgggcacgcggctgtccgtggcctttgccgcgcccgaccgg
cccggcggcgtgcgctgggtgtcgcccagccgcctgacgcaggtggacacggtgttcgcg
atgacggtgcacaagtcgcaaggctctgagttcacgcacgcggccctggtcattccgccg
gcctggaaccccgtgctgacgcgcgagctggtctacaccggcatcacgcgcgccagccac
tggtgttcgctggtgctggccggcgcccatggcgaggaggtgctggaactggccgtgaaa
cgccgcgtgctgcgcgcgagcgggctgctggcggatgcgctggagggctcgaggcatgag
tcgcgagcctag
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