Comamonas serinivorans: CCO03_11450
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Entry
CCO03_11450 CDS
T04892
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
cser
Comamonas serinivorans
Pathway
cser03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cser00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CCO03_11450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cser03400
]
CCO03_11450
Enzymes [BR:
cser01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CCO03_11450
DNA repair and recombination proteins [BR:
cser03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CCO03_11450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
AAA_25
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ARU05216
UniProt:
A0A1Y0ENP7
LinkDB
All DBs
Position
complement(2705165..2709802)
Genome browser
AA seq
1545 aa
AA seq
DB search
MSTEWFDSGFDPHDDAGAEPGQPAHATPPWDDLPAEGGMAAAPWAEAVGREPTAHRPLDA
AGAFDDATTARASSPGLRGEPRPEPRPLPTLDALRLPLRGAHLIEASAGTGKTYTIAQLY
LRLVLGHGGSGPDGSGFVRALTPPEILVVTFTDAATHELRDRIRQRLGEAAAAFEAPAGD
EAGAGDDLLRLKGDFTPEQWPGCARLLRVAADWMDEAAVSTIHSWCYRMLREHAFDSGNL
FTQTLLSDESELLLQAAQDYWRQQFYALDANEARVLSQLMPGPEALVKAIRPLLAQDDAA
WQFGDQALDPTVSPARLLAEVAQHSRESERLQDAARTAWAAAADRLERQFRTWLPMLNGQ
RYRGKEQHLETWLADLRRWSEGGDAPRGKGRKDIAYFGLSGIRLAGGQLPPPHPAFVAID
DWLAVADNEQAKGDHQALRAQLLAHATWQIRAGLAREKQRRAELGFDDVLRRLHQALTAP
HGPVLAGRIRAQFPVAMIDEFQDTDPLQWGMFKAVYGAHADATETGEAGAAMQGDGDDHA
LLLIGDPKQAIYGFRGADIHTYLQARQATEGRHHSLGTNYRSTQAMVHAVNAVFGWAEAH
FPEAAFRFAQGEGAPPWPAAQGLLPLGRDGGAGAVRRAAAANPMPFTPVVAHGRAERLVL
AGQQASALTWWWLAPEAGQDTVSASLYRRHMAESCASQLVDWLTAVPQGDTGFLQADGRI
RPLRPRDIAVLVRDRLEAEAIRQAMAARGIASAYLSERESVFDSREAQDLAVWLEAVHAD
AQARPLRAALGTASMGRSHAWLERLNHDEAVWDDMVQRFRGYRQLWLAQGVLPMVRQLLQ
DFALPSAWLAQPQGARTLTNMLHLAEWLQTQAPLHDSPQALLRELARQMDAPGEAGDAAR
LRLESDDDLIKVVTIHKSKGLEYPLVLLPFMASWKSLRAHTSLLLPANEASDGRRVNLDP
KDPADKPLAELERQREDLRLTYVALTRAQHAVWLGVAPLVVGQARDCQVHESAIGYLVGG
TRPRSGPAFAQQVQALCDDSDQAARALGIPGRTMQRLPAPAIHSRRWAGEAAAPRRIVTR
AAPPRHWQPWWIASYSALTSDLLHEDGLTLPMAGELPADALAQPAGPGAADPADGRVAQG
QQRDGVNGVWIDSRHPEIGKWSIPRETEQGLPTRPHAEPESPASEDAFELALASHVDAQL
ALAQQEAREAALDDTDWDGLRREAARLAAPPQGLHAFARGAEVGTFWHELLQLAAMQGFA
RMAEAPDKLGELVARRARVRGWGDQAPALTQWLLQWLHMPLPLQAAAGHGLPDLPAEPAP
TAPTVRLVDLPAGRMQAELEFWLPVHDAAAQRIDAVVRAHIEPGWARPALSPLRLRGMLK
GYMDVVFEAPRAATLAPVPEAGALPDHDASMAVDVNDEGVRNAANELEIGSGAYSDEAGR
FYVLDYKSNWLGPDDASYHPDAVRAAALANRYDLQAALYALALHRLLRTRLPDYDPARHL
GGSLTWFLRGSARADGGVWGCAATPALLDELDALFEAAGHVEGQA
NT seq
4638 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgagtggtttgattcgggcttcgacccccatgacgacgccggtgccgagccc
ggccagccggcccacgccacgccgccctgggacgacctgccggccgaggggggcatggcg
gccgctccctgggcggaggccgtgggacgcgaacccaccgcccaccgtccgctggatgca
gccggcgcattcgatgacgcaaccaccgcacgggcctcctcgccgggtctgcgtggcgag
ccacggcctgaaccccggccgctgccgacgctcgacgccttgcgcctgccgctgcggggc
gcgcacctgatcgaggccagcgccggcaccggcaagacctacaccatcgcccagctctac
ctgcggctggtgctgggccacggcggcagcggaccggacggctcgggtttcgtgcgggcg
ctgacgccgcccgagatcctggtcgtgaccttcaccgacgccgccacgcacgagctgcgc
gaccgcatccgccagcgcctgggcgaggcggccgccgcgttcgaggcgccggccggtgac
gaagccggagccggcgacgacctgctgcgcctgaagggcgacttcacgcccgagcaatgg
ccgggctgtgcgcgcctgctgcgcgtggccgccgactggatggacgaggccgccgtgtcc
accatccacagctggtgctaccgcatgctgcgcgaacacgccttcgacagcggcaacctg
ttcacgcagaccctgctcagcgacgaaagcgagctgctgctgcaggcggcgcaggattac
tggcggcagcagttctatgcgctggacgcgaacgaggcgcgggtgctgagccagctcatg
cccggccccgaggcgctggtgaaggccatccggccgctgctggcgcaggacgacgcggcc
tggcagtttggcgaccaggccctggaccccacggtgtccccggcgcgcctgctggccgag
gtggcgcagcacagccgcgagtccgaacggctgcaggacgcggcgcgcaccgcctgggcg
gccgcggccgaccggctggagcgccagttccgcacctggctgcccatgctcaacggccag
cgttacaggggcaaggagcagcacctggagacctggctggccgacctgcggcgctggagc
gagggcggcgacgccccgcgcggcaaaggccgcaaggacatcgcctacttcgggctgtcg
ggcatccggctggcgggcgggcagctgccgccaccgcacccggcctttgtcgccatcgac
gactggctggcagtggccgacaacgaacaggccaagggggaccaccaggcgctgcgcgcc
cagctgctggcccacgcgacctggcagatccgggccgggctggcgcgcgagaagcagcgc
cgggccgagctgggctttgacgatgtgctgcggcgcctgcaccaggccctgacggcgccg
catggcccggtgctggccggccgcatccgcgcgcagttcccggtggccatgatcgacgaa
ttccaggacaccgacccgttgcagtggggcatgttcaaagcggtgtatggtgcccatgcc
gatgctacagaaacgggcgaggctggtgctgccatgcaaggggacggtgacgaccacgcg
ctgctgctgatcggcgatcccaagcaggccatctacggttttcgcggcgccgacatccac
acctacctgcaggcgcgccaggccaccgaggggcgccaccactcgctgggcaccaactac
cgctccacccaggccatggtccacgccgtgaacgcggtgtttggctgggccgaggcgcac
tttcccgaagccgctttccgcttcgcccagggcgagggcgcaccgccctggccggccgcg
caaggcctgctgccgctggggcgtgacggtggcgcgggcgccgtgcgccgggccgccgcg
gccaaccccatgccgttcacgcccgtggtcgcccacggccgcgccgaacgcctggtgctg
gcgggccagcaggccagcgcgctcacctggtggtggctggcgcccgaggccgggcaggac
accgtgtccgccagcctgtaccgccgccacatggccgagtcctgcgcctcgcagctggtc
gactggctgacggccgtgccgcagggcgacacgggtttcctgcaggccgatggccgcatc
cgcccgctgcgcccgcgcgacatcgccgtgctggtgcgcgatcgcctcgaggccgaggcc
attcgccaggccatggccgcgcgcggcatcgccagcgcctacctgtccgagcgcgaatcg
gtgttcgacagccgcgaagcgcaggatttggccgtctggctcgaagccgtgcacgccgac
gcccaggcccggcccctgcgcgccgcgctgggcacggccagcatgggccgcagccatgcc
tggctggagcgcctgaaccacgacgaagccgtgtgggacgacatggtgcagcgctttcgc
ggctaccggcagctgtggctggcgcagggcgtgctgcccatggtgcgtcagctgctgcag
gacttcgcgctgccctcggcctggctggcccagccgcagggcgcgcgcaccctgaccaac
atgctgcacctggctgaatggctgcagacccaggcgccgctgcacgacagcccgcaggcc
cttctgcgcgagctggcgcgccagatggacgccccgggcgaggccggcgatgccgcgcgg
ctgcggctagaaagcgacgacgacctgatcaaggtcgtcaccatccacaagtccaagggg
ctggagtacccgctggtgctgctgcccttcatggccagctggaagagcctgcgcgcccac
accagcctgctgctgccggcgaacgaggcctcggacgggcggcgcgtgaacctggacccc
aaagaccccgccgacaaaccgctggccgagctggagcgccaacgcgaagacctgcgcctg
acctatgtggcgctgacgcgcgcccagcatgccgtgtggctgggcgtggcgcccctggtc
gtggggcaggccagagactgccaggtgcacgagagcgccatcggctacctggtgggcggc
acgcgtccgcgcagcgggccggcctttgcgcagcaggtgcaggcgctgtgcgacgacagc
gaccaggccgcgcgcgccctgggcatccccggccgcaccatgcagcggctgccggcgccg
gccatccacagccggcgctgggctggcgaggccgcggccccgcgccgcatcgtcacgcgt
gcggccccgccgcgccactggcagccgtggtggatcgccagctactcggcgctgaccagt
gacttgctgcacgaagacggcttgacgctgcccatggccggcgagctgccggcggacgcc
ctggcccagcccgcgggaccgggcgcggcggacccggcggatggccgggtcgcacaaggt
cagcagcgagatggggtgaatggggtatggatcgattcccgtcatcctgaaatcggcaaa
tggagcataccccgtgagacggagcagggattgcccacccgcccgcacgccgagcccgaa
agccccgccagcgaagacgccttcgagctggcgctggccagccacgtcgacgcgcaactg
gccctggcgcagcaagaggcccgcgaggccgcgctggacgacaccgactgggacggcctg
cggcgcgaagcggcacgcctggcggccccgccgcaaggcctgcacgcctttgcgcgcggg
gccgaggtcggcaccttctggcacgagctgctgcagctggcggccatgcagggctttgcg
cgcatggccgaagcccccgacaagctgggggagctggtggcgcgccgcgcccgcgtgcgg
ggctggggcgaccaggcacccgcactgacccaatggctgctgcagtggctgcacatgccg
ctgcccctgcaggccgctgctggccacggcctgcccgacctgcctgcagagccggcgccc
acggcacccaccgtgcgcctggtggacctgccggccgggcgcatgcaggccgagctggag
ttctggctgccggtgcacgatgcggccgcccagcgcatcgacgccgtggtgcgcgcccac
atcgagcccggctgggcgcggcccgcgttgtcgccgctgcgcctgcgcggcatgctcaag
ggctacatggacgtggtgttcgaggcgccgcgggctgcgacgttggcgcctgtgcccgag
gcgggcgcactgcccgaccacgacgcgagcatggccgtggatgtgaacgatgagggggta
cgcaacgctgccaatgaactggaaatcggttccggtgcatactccgatgaggcagggcgt
ttttacgtgctggattacaaaagcaactggctgggcccggacgacgccagctaccatccc
gatgccgtgcgcgccgcggccctggccaaccgctacgacctgcaggccgcgctctatgcg
ctggcgctgcaccgcctgctgcgcacgcgcctgccggactacgaccccgcacgccacctg
ggcggcagcctgacctggttcctgcgcgggagcgcgcgggccgacggcggcgtctggggg
tgcgcggcgacgccggccctgctggacgagcttgatgccctgtttgaggcggcgggccac
gtggaggggcaggcatga
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