Comamonas serinivorans: CCO03_12060
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Entry
CCO03_12060 CDS
T04892
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cser
Comamonas serinivorans
Pathway
cser00061
Fatty acid biosynthesis
cser00071
Fatty acid degradation
cser01100
Metabolic pathways
cser01212
Fatty acid metabolism
cser02024
Quorum sensing
cser04146
Peroxisome
Module
cser_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cser00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CCO03_12060
00071 Fatty acid degradation
CCO03_12060
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CCO03_12060
09145 Cellular community - prokaryotes
02024 Quorum sensing
CCO03_12060
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cser01004
]
CCO03_12060
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cser04147
]
CCO03_12060
Enzymes [BR:
cser01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CCO03_12060
Lipid biosynthesis proteins [BR:
cser01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CCO03_12060
Exosome [BR:
cser04147
]
Exosomal proteins
Exosomal proteins of breast milk
CCO03_12060
Exosomal proteins of breast cancer cells
CCO03_12060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ARU05319
UniProt:
A0A1Y0EPU6
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All DBs
Position
complement(2859899..2861770)
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AA seq
623 aa
AA seq
DB search
MARHAPVGLWDVADLKPATGVTVPGETVPEIFWNAVAQRGEAVWLRQKELGYWRSWSWNQ
TAEAVTEIGHGLMALGLAPGERVSILSNTVIEWVWCDLAILSAGGVSSGIYPTDSADQVE
HLSADSSSVVLFVEDEEQLDKALTVRDRLPMLRHIVVFDMKGLRHLRDDQVMSLDALRER
GRAHAAQHAGALRARSSAVKPQDLAILIYTSGTTGKPKGAMHSHAGLVYSTRGYNAVMEQ
TDQDERMCFLPLCHVAERLGGAYLGMYTGTRLNFVENPDTVAENVREIAPTVALAVPRVW
EKFYSAVMLGVQEASRLQQAIYRWSIAQGVGVVESVLAGKPVGAGQKLRFRLARLLALDN
VRKLIGIHRARYLVTGAAPISPDLLRWYMALGIPMLEVWGMTETCGASAAVPVQCIKPGT
IGPATPYNEVKLDPQTQELLVRGPNVFMGYLNLPEKTAETIDPDGWLHTGDVGSVDADGF
FRITDRMKDIIITAGGKNITPSEWENELKFSPYVTDAVVIGDARQYLTAIIMIDQENVEK
FAQDHDVPFSNYASLTRTREVQELIQAEIDRVNAKFARVEQIKKFFLLDTQLTAEDEELT
PTMKLKRKLVQAKYAEQIEAMYR
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggcaagacatgcgcccgttggcctgtgggatgtggccgacctgaagcccgccacgggt
gtgaccgtgcccggcgaaaccgtgccggagatcttctggaacgctgttgcccaacgcggg
gaggcggtctggttgcgccagaaagagctggggtattggcgcagctggtcctggaaccag
acggcagaggccgtgaccgagatcggacacggcttgatggcgctgggcctggcgccgggc
gagcgcgtgtccatcctgtccaacaccgtcatcgaatgggtgtggtgcgacctggccatc
ctcagcgcgggcggcgtcagcagcggcatctaccccaccgattcggccgaccaggtcgag
cacctgagcgcggactcgtcgtcggtggtgctgttcgtcgaggacgaggagcagctggac
aaggcgctgaccgtgcgcgatcgcctgcccatgctgcgtcacatcgtggtgttcgacatg
aagggcttgcgccacctgcgcgatgaccaggtcatgtcgctcgatgcgctgcgcgaacgc
ggccgagcccacgcggcccagcatgcgggcgccctgcgggcgcgctccagcgcggtcaag
ccgcaggacctcgccatcctgatctacacctcgggcaccacgggcaagcccaaaggggcg
atgcacagccacgccggcctggtctacagcacccgcggctacaacgcggtgatggagcag
accgatcaggacgagcgcatgtgctttctgccgctgtgccacgtggccgagcgcctgggt
ggcgcctacctggggatgtacaccggcacgcgcctgaatttcgtcgagaaccccgacacc
gtggccgaaaacgtgcgcgaaatcgcgcccaccgtggccctggccgtgccccgggtgtgg
gagaagttctactccgcagtgatgctgggcgtgcaggaggccagccgcctgcagcaggcc
atctaccgctggtcgatcgcccagggcgtgggcgtcgtcgagtccgtgctggccggcaag
cccgtcggggcggggcagaagctgcgctttcgactggcgcgcctgctggccctggacaac
gtgcgcaaactcatcggcatccaccgggcgcgctacctggtcaccggcgctgcgcccatt
tcacccgacttgctgcggtggtacatggccctgggcatccccatgctcgaggtctggggc
atgaccgaaacctgcggcgcgtcggccgccgtgccggtgcagtgcatcaagcccggcacc
atcgggccggccacgccgtacaacgaggtcaagctggacccgcagacgcaggagctgctg
gtgcgcggccccaacgtcttcatgggctacctgaacctgcccgagaagacggccgaaacc
atcgaccccgacggctggctgcacacgggcgatgtgggcagcgtggatgcagacgggttt
ttccgcatcacggaccgcatgaaggacatcatcatcacggcggggggtaagaacatcacc
cccagcgagtgggagaacgagctcaagttcagcccctacgtgaccgatgccgtggtgatc
ggcgatgcgcggcaatacctcacggccatcatcatgatcgaccaggagaacgtggagaag
tttgcccaggaccacgacgtgcccttcagcaactacgccagcctgacccgcacccgagag
gtgcaggagctgatccaggccgaaatcgaccgtgtgaacgccaagttcgcgcgcgtcgag
cagatcaagaagtttttcctgctcgacacccagctcaccgccgaggacgaggagctcacc
cccacgatgaagctcaagcgcaagctggtgcaagccaagtacgccgagcagatcgaggcc
atgtaccgctga
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