KEGG   Comamonas serinivorans: CCO03_12435
Entry
CCO03_12435       CDS       T04892                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
cser  Comamonas serinivorans
Pathway
cser02024  Quorum sensing
cser03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cser00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CCO03_12435
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CCO03_12435
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cser03019]
    CCO03_12435
   03036 Chromosome and associated proteins [BR:cser03036]
    CCO03_12435
Messenger RNA biogenesis [BR:cser03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     CCO03_12435
Chromosome and associated proteins [BR:cser03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    CCO03_12435
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: ARU05388
UniProt: A0A1Y0EPI4
LinkDB
Position
complement(2946538..2946783)
AA seq 81 aa
MSNKGQLLQDPFLNTLRREHVPVSIYLVNGIKLQGQIESFDQYVVLLRNTVTQMVYKHAI
STIVPGRPVNLALNDAGEGQA
NT seq 246 nt   +upstreamnt  +downstreamnt
gtgagcaataaagggcaacttctacaagacccgtttctcaacaccctgcgtcgcgagcat
gtgccagtgtccatttatttggtcaacggcatcaagctgcaaggtcagattgagtctttc
gaccagtatgtggtcctcctgcgaaacacggtgacccagatggtgtacaagcacgccatc
tcgaccattgttcccggccgccctgtgaacctggccctgaacgacgctggagaaggccag
gcctga

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