Comamonas serinivorans: CCO03_12435
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Entry
CCO03_12435 CDS
T04892
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
cser
Comamonas serinivorans
Pathway
cser02024
Quorum sensing
cser03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cser00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CCO03_12435
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CCO03_12435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cser03019
]
CCO03_12435
03036 Chromosome and associated proteins [BR:
cser03036
]
CCO03_12435
Messenger RNA biogenesis [BR:
cser03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CCO03_12435
Chromosome and associated proteins [BR:
cser03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
CCO03_12435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
ARU05388
UniProt:
A0A1Y0EPI4
LinkDB
All DBs
Position
complement(2946538..2946783)
Genome browser
AA seq
81 aa
AA seq
DB search
MSNKGQLLQDPFLNTLRREHVPVSIYLVNGIKLQGQIESFDQYVVLLRNTVTQMVYKHAI
STIVPGRPVNLALNDAGEGQA
NT seq
246 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaataaagggcaacttctacaagacccgtttctcaacaccctgcgtcgcgagcat
gtgccagtgtccatttatttggtcaacggcatcaagctgcaaggtcagattgagtctttc
gaccagtatgtggtcctcctgcgaaacacggtgacccagatggtgtacaagcacgccatc
tcgaccattgttcccggccgccctgtgaacctggccctgaacgacgctggagaaggccag
gcctga
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