KEGG   Comamonas serinivorans: CCO03_13840
Entry
CCO03_13840       CDS       T04892                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
cser  Comamonas serinivorans
Pathway
cser03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cser00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CCO03_13840
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cser03400]
    CCO03_13840
DNA repair and recombination proteins [BR:cser03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CCO03_13840
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CCO03_13840
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII DEAD UVR AAA_30 AAA_22 Kinesin AAA_16 Microtub_bd
Other DBs
NCBI-ProteinID: ARU05620
UniProt: A0A1Y0EQB0
LinkDB
Position
complement(3252204..3254321)
AA seq 705 aa
MSSETSSPAPAESAPEGGQFVSFPDSPFQLFQPYPPAGDQPKAIAQLVEGIEDGEAFQTL
LGVTGSGKTFTMANVIARTGRPAIVFAPNKTLAAQLYSEFREFFPKNAVEYFVSYYDYYQ
PEAYVPQRDLFIEKDSAINEHIEQMRLSATKSVLERRDTIVVATVSAIYGIGSPESYTKM
RFILRVGDQVGQRDAIAQLVRMQYKRSDMDFTRGTFRVRGDTIDVFPSEHSELAVRLELF
DDEVESIQLFDPLTGRIRQKVPRFTIYPSSHYVTPREQVMNAVETIKLELVERTKQLLDE
GKLVETQRLEQRTRFDLEMLSEVGHCKGIENYTRHLSGAKPGDPPPTMTDYMPQDALMFL
DESHQMIGQLNAMYNGDKARKTTLVEYGFRLPSALDNRPLKFAEFEERMRQVVFVSATPA
DYEKTHAGQVVEQVVRPTGLVDPLVEVRPATHQVDDVLSEIRLRTNVGERVLVTTLTKRM
AEQLTEYLSENGVKVRYLHSDVDTVERVEIIRDLRLGLFDVLVGINLLREGLDIPEVSLV
AILDADKEGFLRAERSLIQTIGRAARNVNGKAILYADRITESMKKAMGETERRRALQIAF
NEAHGITPRGIVKQVRDLIDGVYSEKASAAEAQAEDLALRRAQVEDMSEKDIAKEIKRLE
KLMIEHAKNLEFEQAAAVRDQLHLLKEQAFGAAGDDTLSSLAGRG
NT seq 2118 nt   +upstreamnt  +downstreamnt
atgtcctctgaaacctcctcgcccgcgcccgccgagtccgccccggaaggcgggcagttc
gtcagctttcccgattcgccgtttcagctgttccagccctatccgcccgcgggcgaccag
cccaaggccattgcgcagctggtcgagggcatcgaggatggcgaagccttccagaccctg
ttgggcgtgaccggctcgggcaagaccttcaccatggccaacgtgatcgcgcgcaccggt
cggccggccatcgtgttcgcgcccaacaagacgctggccgcgcagctgtacagcgagttc
cgcgagttctttcccaagaacgcggtcgagtacttcgtcagctactacgactactaccag
cccgaggcctatgtgccgcagcgcgacctgttcatcgagaaggacagcgccatcaacgag
cacatcgagcagatgcggctgtcggccaccaagagcgtgctggagcgccgcgacaccatc
gtcgtggccaccgtctcggcgatttacggcattggctcgcccgagtcgtacaccaagatg
cgcttcatcctgcgcgtgggtgatcaggtgggccagcgcgacgccatcgcgcagctggtg
cgcatgcagtacaagcgcagcgacatggacttcacgcgcggcaccttccgcgtgcgcggc
gacaccatcgacgtgttcccgtctgagcacagcgagctggccgtgcggctggagctgttc
gacgacgaggtggagagcattcagctgttcgacccgctgaccggccgcatccggcagaag
gtgccgcgtttcaccatctaccccagcagccactacgtcacgccgcgcgagcaggtgatg
aacgcggtcgagaccatcaagctcgagctggtcgagcgcaccaagcagctgctggacgag
ggcaagctggtcgagacgcagcggctggagcagcgcacgcgctttgacctggagatgctc
agcgaggtcgggcattgcaagggcatcgagaactacacgcgtcacctgtcgggcgccaag
cccggtgatccgccgccgaccatgacggactacatgccccaggacgccctcatgttcctg
gacgagagccaccagatgatcggccagctcaacgccatgtacaacggcgacaaggcgcgc
aagaccacgctggtggagtacggctttcgcctgcccagcgcgctggacaaccggccgctg
aagttcgccgaattcgaagaacgcatgcgtcaggtcgtgttcgtgtcggccacgccggcc
gattacgaaaagacccacgcgggccaggtggtggagcaagtcgtgcggcccacgggcctg
gtcgatccgctggtcgaggtgcggcccgccacccaccaggtggacgacgtgctgtctgaa
atccgcctgcgcaccaacgtcggcgagcgcgtgctggtcacaaccctgaccaagcgcatg
gccgagcagctgaccgagtacctgagcgagaacggcgtgaaggtgcgctacctgcactcg
gacgtggacaccgtggagcgggtggagatcatccgcgacctgcgcctgggcctgttcgac
gtgctggtcggcatcaacctgctgcgcgaggggctggacatccccgaggtgtcgctggtc
gccatcctcgatgccgacaaggaaggctttctgcgcgccgagcgcagcctgatccagacc
atcggccgcgcggcgcgcaacgtgaacggcaaggccatcctgtacgccgatcgcatcacc
gagtcgatgaaaaaagccatgggcgagaccgagcgccgccgggcgctgcagatcgccttc
aacgaggcccacggcatcacgccgcgcggcatcgtcaagcaggtgcgcgacctgatcgac
ggtgtctacagcgagaaggccagcgccgccgaagcgcaggccgaggacctggcgctgcgc
cgcgcccaggtcgaggacatgagcgagaaggacatcgccaaggagatcaagcggctggag
aagctcatgatcgagcacgccaagaacctcgagttcgagcaggccgctgccgtgcgcgat
cagctgcacctgctcaaggaacaggcctttggcgcggcgggcgacgacacgctgagcagc
ctggccggacgcggctga

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