Comamonas serinivorans: CCO03_15720
Help
Entry
CCO03_15720 CDS
T04892
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
cser
Comamonas serinivorans
Pathway
cser02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cser00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CCO03_15720
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
cser02022
]
CCO03_15720
02035 Bacterial motility proteins [BR:
cser02035
]
CCO03_15720
Two-component system [BR:
cser02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
CCO03_15720
Bacterial motility proteins [BR:
cser02035
]
Pilus system
Twitching motility proteins
CCO03_15720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
Mg_chelatase
AAA
AAA_2
AAA_3
HTH_23
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ARU05925
UniProt:
A0A1Y0EQJ7
LinkDB
All DBs
Position
3686438..3687952
Genome browser
AA seq
504 aa
AA seq
DB search
MPATPARILIVDDEPDLRTLYELTLLREGHKVEAAGTVSEAMSLLKGHGFDLIITDMRLP
DGLGLDILQHVTQTQRREKAVVITAYGSAESAVESLKAGAFDYLTKPVDLKQFRAVVSTA
LAAQAPPAVAAQERSTAPAPLAAERDPGSMTHPAGEAALHRLVGNSALMQNVRARIVKAA
RSMAPVLVRGESGTGKELVAKGVHACSHRSEGPFVAVNCGAIPEALLEAEFFGARKGSFT
GATQDRPGFFQAAQGGTLFLDEIGELPLSMQAKLLRALQERKVRALGTTQEEAVDVRIVS
ATHRDLAAAVQQGTFRQDLYYRLNVIEILLPALRDRLEDLPALCDALLDKLATESGYPIP
HLTPRQLRTLASLPLEGNVRELENLLQRAIALGDESKLQLDTSLADDPEVLAIDIPLTPS
TTPEFPIVPPAPVRTSQVPASDTTLPADLSKWLDEQERQVLVKALEETNFNRTAAAAKLG
LNLRQIRYRMARLNINAPGHDDDA
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgcccgctacccccgctcgcattctcatcgtggacgacgaaccggatttgcgcaccctg
tatgagctcacccttttgcgcgaaggccacaaggtggaggcggccggcacggtgagcgag
gccatgtccttgctcaaaggccatggcttcgacctcatcatcaccgacatgcgactgccg
gatggcctgggtctggacatcctgcagcacgtcacgcaaacacagcggcgcgagaaggcc
gtggtcatcaccgcctatggctcggccgaaagcgccgtcgaatccctgaaggccggtgcc
ttcgactacctcaccaagccggtcgatctcaaacagttccgcgccgtcgtgagcacggcc
ttggcggcgcaggcgccccccgccgtcgcggcgcaagagcgcagtaccgcgccggctccc
ctggccgctgaacgcgatcccggcagcatgacccatcccgccggcgaagcggcgctccat
cgcctggtgggcaactccgcgctgatgcagaacgtgcgggcacgcatcgtgaaggcagcc
cgctccatggcgcccgtgctggtgcgcggcgaatccggcaccggcaaagagctggtggcc
aagggcgtccatgcctgcagccaccgcagcgagggaccgtttgtcgccgtgaactgcggc
gccattcccgaagccctgctcgaggccgaatttttcggcgcccgcaaaggctcgttcacc
ggcgccacccaggaccgcccgggcttctttcaagccgcgcaaggcggcaccttgttcctc
gatgaaatcggcgaactcccgctgtccatgcaggccaagctgctgcgcgccctgcaggaa
cgcaaagtgcgcgccttgggcaccacacaggaagaagccgtggacgtgcgcatcgtcagc
gccactcaccgggatctggcggctgccgtgcagcagggcaccttccgccaggacttgtac
taccggctgaacgtcatcgaaatcctgttgcccgccttgcgcgaccgcctggaagacctg
cctgccctgtgcgacgcgctgttggacaagctggccaccgaaagcggctaccccataccc
cacctgacgccgcggcagctccgcaccctcgcctcattgccgctggaaggcaacgtgcgc
gagctggaaaacctgctgcaacgcgccatcgcgctgggcgatgaatcgaagctgcagctg
gacacgtcgctggccgacgaccccgaagtcctcgccatcgacatcccgctgacgccctcc
acgacgcccgagttcccgatcgtgccccctgcaccggtccgcacgtcgcaggttccggcc
agcgacaccaccttgcccgccgacctgtccaaatggctggacgaacaagagcgccaggtg
ttggtcaaggccctggaagagacgaacttcaaccgcaccgcggcggcggccaagctgggc
ctgaacctgcgtcagatccgctaccgcatggcacggctgaacatcaacgcccccggccat
gacgacgatgcctga
DBGET
integrated database retrieval system
