Comamonas serinivorans: CCO03_17235
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Entry
CCO03_17235 CDS
T04892
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
cser
Comamonas serinivorans
Brite
KEGG Orthology (KO) [BR:
cser00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cser03032
]
CCO03_17235
03036 Chromosome and associated proteins [BR:
cser03036
]
CCO03_17235
03400 DNA repair and recombination proteins [BR:
cser03400
]
CCO03_17235
DNA replication proteins [BR:
cser03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CCO03_17235
Chromosome and associated proteins [BR:
cser03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
CCO03_17235
DNA repair and recombination proteins [BR:
cser03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
CCO03_17235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
DUF5666
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
ARU06185
UniProt:
A0A1Y0ER97
LinkDB
All DBs
Position
4025148..4025441
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AA seq
97 aa
AA seq
DB search
MTRSDLVEALAARFDQLTVRDAEVAVKTILDAMSDALARGHRIEIRGFGSFSVTRRPPRQ
GRNPATGQAVQIPEKRVPHFKPGKALREAVDSRTDAE
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atgacccgttccgatctcgttgaagcgctggccgcgcgttttgatcagctgaccgtgcgc
gacgccgaagtggcggtcaagaccatcctcgacgccatgagcgacgcgctggcccgtggg
catcgcattgaaattcgcggctttggcagcttttcggtcacgcgcaggccgccccgccag
ggccgcaacccggccacgggccaggcggtgcagattcccgaaaagcgcgtgccccacttc
aagcccggcaaggccctgcgcgaggccgtcgacagccgcaccgacgcggagtga
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