Comamonas serinivorans: CCO03_18910 Help Entry CCO03_18910       CDS       T04892                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism cser  Comamonas serinivorans Pathway cser02020   Two-component system cser02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:cser00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     CCO03_18910  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     CCO03_18910  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cser03021]     CCO03_18910 Transcription machinery [BR:cser03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      CCO03_18910 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR HTH_38 HTH_23 HTH_5 DUF2344 Motif Other DBs NCBI-ProteinID:  ARU06453 UniProt:  A0A1Y0ES70 LinkDB All DBs Position complement(4421813..4423393) Genome browser AA seq 526 aa AA seqDB search MKQGLSLRVSQHLTLTPQLQQSIRLLQLSTLELDQEVEQMLGDNPFLDREDGEAPQEDFG LAQADAHVSVGDRISERASETESASERPDREPAGGDDEYGASSGDTDNDAGVNWEGDGSN ALSPDDGEWGGDALPRGAGAPDDDALDASERTGMHESLYDTLHRQALALHLSDVDRAAVY FIIESLNEDGYLEESVDDLADGLRPTDVDQRDELIDRLMLALRLVQAMEPTGVGARDLSE CMCLQLDALLQANPDDAIATVARDIVRHPIDLIARRDARKLSQLCGFSETTVRTGLACIS RLEPKPGRRFVNVERNIVVPDVIVSRIEGNGANPRFRVRLNQEVMPKLRVNDVYANALRG GKSDSHQALQQRLQEARWFIKNIQQRFDTILRVSQAIVERQRSFFIHGELAMQPLVLREI ADELGLHESTISRVTTAKYMATPFGTFELKYFFGSGLDTEAGGSASSTAVRALIKQFIAE ENPKKPLSDNQISEMLKEQGIDCARRTVAKYREAMRIPTTTLRRAL NT seq 1581 nt NT seq  +upstreamnt  +downstreamnt atgaagcaaggcctgtcgctccgtgtctcgcagcacctgacgctgaccccgcagctgcag cagtcgatccggctgttgcagctgtccacgttggaactcgaccaggaggtcgagcagatg ctgggggacaaccccttcctcgaccgtgaagacggcgaagcgccgcaggaggacttcggt ctggcccaggccgatgcccacgtgagcgtcggggaccgcatcagcgagcgcgccagcgaa accgagtctgccagcgagcgtccggaccgtgagccagccggtggtgatgacgagtatggg gcatcctccggtgatacagacaacgacgctggcgtgaactgggagggtgatggctccaac gccctgtcgcccgacgatggcgagtggggcggcgatgcgctgccgcgcggcgctggcgcc cccgacgacgacgcgctggatgcgagcgagcgcaccggcatgcacgagtcgctctacgac acgctgcaccgccaggccctggccctgcacctgtccgacgtggaccgcgcggcggtgtac ttcatcatcgaatcgctgaacgaagacggctacctcgaagagtccgttgacgacctggcc gacggcctgcggccgaccgacgtggaccagcgcgacgagctgatcgaccgcctgatgctg gcgctgcgcctggtgcaggccatggagcccaccggcgtgggcgcgcgcgacctcagcgaa tgcatgtgcctgcagctcgacgcactgctgcaggccaaccccgacgacgccatcgccacc gtggcgcgcgacatcgtgcgccacccgatcgacctgatcgcgcgccgcgatgcgcgcaag ctgtcgcagctgtgcggcttcagcgaaaccacggtgcgcaccggcctggcctgcatcagc cggctcgagcccaagcccggtcgccgcttcgtcaacgtcgagcgcaacatcgtggtgccc gacgtcatcgtctcgcgcatcgagggcaacggcgccaacccgcgttttcgcgtgcgcctg aaccaggaggtgatgcccaagctgcgcgtgaacgacgtctacgccaatgccctgcgcggc ggcaagagcgactcgcaccaggccctgcaacaacggctgcaagaagcgcgctggttcatc aagaacatccagcagcgcttcgacaccatcttgcgcgtgtcgcaggccatcgtcgagcgc cagcgcagcttcttcatccatggcgagctggccatgcagccactggtgctgcgcgaaatc gccgatgagctgggcctgcacgaatcgaccatctcgcgcgtgaccacggccaagtacatg gccacgccgttcggcaccttcgagctgaagtatttcttcggctccgggctggacacggag gccggtggcagcgcctcgagcacggcggtgcgggcgctcatcaagcagttcatcgccgaa gaaaaccccaagaagccgctgtcggacaaccagatctccgagatgctcaaggagcagggc atcgactgcgcgcgccgcacggtggccaagtaccgcgaggccatgcgcatccccacgacc acattgcgtcgagcattgtga

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