KEGG   Comamonas serinivorans: CCO03_19330
Entry
CCO03_19330       CDS       T04892                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
cser  Comamonas serinivorans
Pathway
cser02020  Two-component system
Brite
KEGG Orthology (KO) [BR:cser00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CCO03_19330
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cser03021]
    CCO03_19330
Transcription machinery [BR:cser03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CCO03_19330
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 HTH_23 HTH_38 Sigma70_ECF GerE HTH_32 HTH_11 HTH_24 HTH_20 HTH_40 DUF6362 Phage_terminase HTH_AsnC-type HTH_IclR HTH_10 HTH_50 HTH_5 TnsD NUMOD1
Other DBs
NCBI-ProteinID: ARU06524
UniProt: A0A1Y0ES77
LinkDB
Position
complement(4514735..4515289)
AA seq 184 aa
MGAVSSPPPLLSPVQQAQHLFTGHHAWLLGRLQARLRNPADAQDVAAETFLRVCGAREPV
AIASPRAFLTTIAKRLLVSLWRRRELEQAYLDALARQPEDCAPSPEDRAVLLETLAHIAH
ALDGLPLKARQTFVLSQIDGLGYQAIADELGISHSTVRRHMAEGFRRTALALARQDAGIG
LPRA
NT seq 555 nt   +upstreamnt  +downstreamnt
ttgggcgccgtgtcgtcgcctccccctctcctcagtcccgtgcaacaggcccagcacctg
ttcacgggccatcacgcctggctgctggggcggctgcaggcgcggctgcgcaacccggcc
gatgcgcaggacgtggcggccgagacctttttgcgcgtgtgcggcgcccgcgaacccgtg
gccatcgcctcgccgcgcgccttcctgaccaccatcgccaagcgcctgctggtgtcgctg
tggcgccggcgcgagctggaacaggcctacctcgacgccctggccaggcagcctgaggac
tgtgccccgtcgcccgaagaccgggccgtgctgctcgagacgctggcccacatcgcgcac
gcgctcgacggcctgccgctcaaggcgcgccagacctttgtgctgagccagatcgacggc
ctgggctaccaggccatcgccgacgagctgggcatctcccacagcaccgtgcgccgccac
atggccgagggctttcgccgcaccgcgctggccctggcgcggcaggatgccggcatcggc
ctgccccgggcatga

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