Comamonas serinivorans: CCO03_19330
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Entry
CCO03_19330 CDS
T04892
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
cser
Comamonas serinivorans
Pathway
cser02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cser00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CCO03_19330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cser03021
]
CCO03_19330
Transcription machinery [BR:
cser03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CCO03_19330
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
HTH_38
Sigma70_ECF
GerE
HTH_32
HTH_11
HTH_24
HTH_20
HTH_40
DUF6362
Phage_terminase
HTH_AsnC-type
HTH_IclR
HTH_10
HTH_50
HTH_5
TnsD
NUMOD1
Motif
Other DBs
NCBI-ProteinID:
ARU06524
UniProt:
A0A1Y0ES77
LinkDB
All DBs
Position
complement(4514735..4515289)
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AA seq
184 aa
AA seq
DB search
MGAVSSPPPLLSPVQQAQHLFTGHHAWLLGRLQARLRNPADAQDVAAETFLRVCGAREPV
AIASPRAFLTTIAKRLLVSLWRRRELEQAYLDALARQPEDCAPSPEDRAVLLETLAHIAH
ALDGLPLKARQTFVLSQIDGLGYQAIADELGISHSTVRRHMAEGFRRTALALARQDAGIG
LPRA
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
ttgggcgccgtgtcgtcgcctccccctctcctcagtcccgtgcaacaggcccagcacctg
ttcacgggccatcacgcctggctgctggggcggctgcaggcgcggctgcgcaacccggcc
gatgcgcaggacgtggcggccgagacctttttgcgcgtgtgcggcgcccgcgaacccgtg
gccatcgcctcgccgcgcgccttcctgaccaccatcgccaagcgcctgctggtgtcgctg
tggcgccggcgcgagctggaacaggcctacctcgacgccctggccaggcagcctgaggac
tgtgccccgtcgcccgaagaccgggccgtgctgctcgagacgctggcccacatcgcgcac
gcgctcgacggcctgccgctcaaggcgcgccagacctttgtgctgagccagatcgacggc
ctgggctaccaggccatcgccgacgagctgggcatctcccacagcaccgtgcgccgccac
atggccgagggctttcgccgcaccgcgctggccctggcgcggcaggatgccggcatcggc
ctgccccgggcatga
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