Chitinirhabdus sediminis: ACTSKR_02645
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Entry
ACTSKR_02645 CDS
T11791
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
cses Chitinirhabdus sediminis
Pathway
cses01100
Metabolic pathways
cses01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
cses00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
ACTSKR_02645 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
ACTSKR_02645 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
ACTSKR_02645 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
ACTSKR_02645 (rfbB)
00525 Acarbose and validamycin biosynthesis
ACTSKR_02645 (rfbB)
Enzymes [BR:
cses01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
ACTSKR_02645 (rfbB)
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Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
adh_short
Motif
Other DBs
NCBI-ProteinID:
XZG70780
LinkDB
All DBs
Position
531531..532592
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AA seq
353 aa
AA seq
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MILVTGGAGFIGGNFVLDWLAQCDEPVVNLDKLTYAGNLDTLKSLDGDARHCFVRGDIGD
RELVASLLAQHRPRAVINFAAESHVDRSIHGPGDFIQTNVVGTFNLLECVRAYWSELPAA
EKTAFRFLHVSTDEVYGTLAADDAPFAETNAFEPNSPYSASKAASDHLVRAWHHTYGLPV
LTTNCSNNYGPYHFPEKLIPLVILNALAGKPLPIYGDGQQIRDWLFVKDHCSAIRRVLEA
GRVGETYNVGGWNEKANLDVVHTICALLDELKPRDDGKGYAEQITFVTDRPGHDRRYAID
ATKLANELGWKPAETFESGIRKTVAWYLENTGWVQNVTSGAYREWVEKQYGAA
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgattttggtgactggcggcgccgggtttatcggcggcaactttgttctggactggctg
gcgcaatgcgatgagccggtcgtcaatctggataaactcacctacgccggcaatctggat
acgctgaagtcgctcgacggcgatgcgcgtcattgctttgtgcgcggcgacatcggagat
cgcgagttggttgccagcctgctggcacagcatcgtccgcgcgcggtaatcaactttgcg
gccgagtcgcacgtggaccgttcgattcacggcccgggtgactttatccagaccaatgtg
gtgggcacctttaatctgcttgagtgcgtgcgcgcctactggagcgagctgccggccgcg
gagaaaacggcatttcgctttctgcacgtttcgaccgacgaggtttacggcaccttggct
gcggatgacgcgccgtttgccgaaaccaatgcgtttgagcccaacagtccatattcggcc
agcaaggccgcgtctgatcatctggtgcgcgcctggcatcacacctacggcctgccggtg
ctgaccaccaactgctcgaacaactacgggccttaccactttcccgagaagctcatcccg
ctggtgattctgaacgcgctggccggcaaaccgttgccgatttatggcgacggccagcaa
atccgcgactggctgtttgtcaaagaccactgcagcgcgattcgccgagtgctggaggcc
ggacgcgtcggcgagacctataacgttggcggctggaatgagaaggccaacctcgacgtg
gttcacaccatctgcgccttgctcgacgagctcaaaccgcgtgacgacggcaagggctac
gccgagcagatcacctttgtcaccgaccgccccggccacgaccgccgctacgcgattgac
gccaccaagctggcaaacgagctgggctggaagccggcagagacgttcgagtccggtatc
cgcaagactgtggcgtggtatctcgaaaacaccggctgggtgcagaacgtcacgtccggc
gcctaccgcgagtgggtggaaaagcagtacggagccgcatga
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