Chitinirhabdus sediminis: ACTSKR_03355
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Entry
ACTSKR_03355 CDS
T11791
Name
(GenBank) sigma-54-dependent transcriptional regulator
Organism
cses Chitinirhabdus sediminis
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_50
AAA_16
HTH_30
Peripla_BP_4
VpsR
HTH_28
AAA_22
Motif
Other DBs
NCBI-ProteinID:
XZG70917
LinkDB
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Position
660489..661859
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AA seq
456 aa
AA seq
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MKKIRATRRVLVVDDEVDLTELLELTLIKMGLDVDAAHGVTEAKALLQANRYDLCLSDMR
MPDGEGLDLIRFVQQQKLDVPVAIITAYGSTQNAVEALKAGAFDYLSKPVALDQLRTLVK
SALKLEVEEPVAASVSGEPVLLGESAAMRQVHELIDKLARSQAPVYITGESGSGKERAAR
LIHTRSSRTDKPFVAVNCGAIPENLMESEFFGYRKGAFTGADADRDGFFQAASGGTLFLD
EVGDLPLAMQVKLLRAIQERKVRKVGATQEEAVDVRIISATHQNLAKLVDAGKFRQDLFY
RLNVIELRMPSLRELGDDIVILARHVLARIAAFNGLDVPELTAEALDMLRRYAFPGNVRE
LENTLERALALSDGARIQADDLQLTPTAPAAGERVSTGGAIGALQDYLDRVEREAIQDAL
QLTGGNRTQAARELGVTFRSLRYRMERLGLSGKDGE
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatacgcgcaactaggcgggtgctggtggtcgacgacgaggtcgacctgacc
gagctgcttgaactcacgctgatcaagatggggctggatgtcgacgcggcacacggcgtg
accgaggccaaagccttgttgcaagccaatcgctacgatctgtgcctgagcgacatgcgc
atgcccgacggcgaaggtctggatctgatccgcttcgtgcagcagcagaagctcgacgtc
cccgttgccatcatcaccgcttatggttcgacccagaacgcggtcgaggcgctgaaagcg
ggcgcgtttgattacctgtccaaaccggtggcgctcgatcagttgcgcacgctggtcaag
tccgcgttgaagctcgaagtcgaagagccggtagctgcctcggtcagcggagagcctgta
ctgctgggcgagtcggcggcgatgcgtcaggtgcacgagctgatcgacaagctcgctcgt
agtcaggctccggtatacatcaccggtgaatcgggtagcggcaaggagcgggccgcgcgg
ctgatccacacccgcagcagtcgtaccgacaagccttttgtggcggtgaactgcggtgcc
attcccgaaaacctgatggaaagcgagttcttcggttaccgcaagggcgcgtttaccggc
gccgatgccgaccgcgacggcttttttcaggcggccagcggtggcacgctttttcttgat
gaagtgggcgatctgccactggcgatgcaggtcaagctgctgcgcgcgattcaggaacgc
aaggtgcgcaaggtgggcgccacgcaggaagaggcggtggacgtacgcattatttcggcc
acgcaccagaacctagccaagctcgtcgatgcaggcaagttccgtcaggatcttttctac
cgcctgaacgtgatcgagctgcgcatgccttcgctgcgcgagctgggtgatgacatcgtg
attctggcgcgccacgttctggcacggatcgctgcctttaacgggctggatgtgcccgag
ctgacggccgaagcgctggacatgctgcggcgttatgcctttcccggcaatgtgcgcgag
ctggaaaacacgctggagcgtgcgctggcgctctccgatggcgcacgtattcaggccgac
gatttgcagctgacgcctaccgcgcccgcggcgggggagcgcgtcagcacgggtggcgcg
atcggcgcgctgcaggattacctcgaccgcgttgaacgcgaagcgatccaggacgcgctg
cagctcactggtggcaaccgcacgcaagcggcgcgcgagctgggcgtcacgttccgctcg
ctgcgctaccggatggagcgtctgggcctgtcgggcaaggacggcgaatga
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