Coccinella septempunctata (seven-spotted ladybird): 123306756
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Entry
123306756 CDS
T07873
Name
(RefSeq) endoribonuclease Dcr-1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cset03036
]
123306756
Chromosome and associated proteins [BR:
cset03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
123306756
microRNA pathway
RISC loading complex
123306756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_platform
Dicer_dsRBD
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
Dicer_PBD
Motif
Other DBs
NCBI-GeneID:
123306756
NCBI-ProteinID:
XP_044744812
LinkDB
All DBs
Position
2:complement(4100085..4105983)
Genome browser
AA seq
1804 aa
AA seq
DB search
MSYYANENFYSHTFTPREYQVELLESAKKRNTVVCSSTDSAKSFIILKLLQEFSWKMRNS
SKKTFLLLDDENISLIGSQIRLITDLNVFSLVTENDVEEEEWNNALHVSEVVLMNENICR
KLMMYDLMDLSKFELIIIDDCLYGERQIVIHELMDIYEKLEEKPRILGFSASLLGLDLQP
EYLESELLRLEKLLDSTVDTSSEIVTLIRLSCRPKEYIVECALSIIVELDSLIRKEVINA
LNFLKEHRFDPSEIYEADLLDEIKQAPNPVDEPMNLLSILLSILTDMGPWCAQQAALTMV
SKIEKLKIKVPYERHFLLLCMVSTVLVKIYSICENYMKDLSDTEKILKFSTSKVLRYLEI
LKKFKPKIEKTDAQEVIPEQGREIEVNARPRKGGRVPRRLFVQKNQTDDSICCLTFVHDR
YRAKVLFNLLCVMSQNHEDYIWISTQYAVEKTADPAKEMKEAEMEHKQHEEVLRKYRAHE
VNIMISTFVLEHGCDLPRCNLVVRFDLPEMFHSYIQSKARARASHAHFVSLVNEDNTMDF
VGKLSQYNEIENILLKRCCSLEPEKEEEHYANSFSALCEPYQPLKQEGSPSVTLSNAVTL
INKYCAKLPSDTFTKLTPIWGEEKIKEGYICRIRLPINSPVKETILSPPMYNSLLARRAA
AFMACQLLHKTGELDDNLQPIGKENFVASEEDWNTFPLDEADEELARENVEPRPGTTKRR
QYYYKKVADALLSCHPVAGERSYFYKIVMTLTCPLPEEQNTRGRKIYPPEDFPQSFGILT
SKKIPKISSFPIFTRSGEVSVDLELCSSNIVLTTKQISQLREFLNYTFTRVLRLQKYLML
FNPDSSLNSYLVVPTNSNSINNTVIDWNFVELINENLTILPEIVPEEKRANYNFDPKKYE
DAVVMPWYRNQDQPQYFYVAEICKNLSPKSSFPGSEYATFEEYYLKKYDIQIQNFSQHLL
DVDHTSARLNFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQILVPELCAIHPFPASLW
RKAVCLPCILYRINALLLADQIRKTVAVELLLGTAELEEHFKWPALNFGWSLCDVIKKSK
EDEAKQDEKPEEIEIEKAEIIEDFDVEIAEITDKIDDDKSSWNIGTWSNDMAGSNEDGEL
TIKYSSPTSWMVADDYDDYTSSESSYSDDDSNDDIGGCRIEFTGNYLAEAVDSEEVKEVV
TSKQCVSVWSDINCSLKNVEELQQKFNEACIRNKKNILNSGMLLKKDQEFTKNEELHNTP
KIHENGMVSNFDFNQLIVNPRKPIYSPKKFRKTRYNCDIIDSSTFKFDAQPSLENHPGPS
PNLLLQALTMSNANDGINLERLETIGDSFLKYAITNYLYSKYENIHEGKLSHLRSKQVSN
LNLYRLGKRKNLGEFMIATKFDPHDNWLPPCFYVPKELEEALLAAQYPANCWTMADMEAT
RDMTLEDICSMVKEKGEEIAFPNSIPYNLVTQHSIPDKSIADCVEALIGAYLIDCGPRGA
LLFMTWLGIKVLPQISDNTYGEFELPHSPLLRHLPNSQEELEVLLDGYNEFERHIGYKFK
DRSYLLQALTHASYSPNRITDCYQRLEFLGDAVLDYLITRHLYEDSRMHSPGALTDLRSA
LVNNTIFASLAVRNGFHKYFRHLSPGLNEVIEKFIRLQEECGHSLVEELFLVIETDAEEV
EDVEVPKALGDIFESVAGAIFLDSEMSLDAVWEVYHKMMQAEIEQFSNKVPKSPIRELLE
LEPETAKFGKPEKLADGRRVRVSVEVFGKGTFKGIGRNYRIAKCTAAKCALKHLKRQGLV
RRNE
NT seq
5415 nt
NT seq
+upstream
nt +downstream
nt
atgtcctactatgccaatgagaatttttattctcatacattcactccaagagaatatcag
gtggaattgttagaatctgcgaaaaaaaggaatactgtagtttgttcgagcacggattca
gctaaatcctttattattttaaaattgctacaagaattttcatggaaaatgagaaattca
tccaaaaaaaccttcttgctattggacgatgaaaatatatctcttattggttcccagata
agattaattaccgatttgaatgttttctctcttgtaaccgaaaatgatgtggaggaagaa
gagtggaataatgctctacatgtcagcgaagttgtcttaatgaatgaaaatatatgccga
aagttgatgatgtatgatttgatggatttgagtaagtttgaattgattattatcgatgat
tgcctttatggggaacgccaaattgtaatacatgaactaatggatatatatgaaaaatta
gaagaaaaacctagaattttaggattttcagctagtttattaggtttggatttgcaacca
gagtatctcgaatcagagttactgagattagagaaactgttggattctaccgttgacacg
tctagtgaaattgtaactcttataagattatcttgccgacctaaggaatatatagttgaa
tgcgctcttagtatcatcgttgaattagacagtttaatcagaaaagaagttattaatgcc
ctaaatttcctcaaagaacataggttcgacccaagtgaaatatatgaggcagacttatta
gatgaaataaagcaagctccaaatccagttgatgaacctatgaacttgttgagcatatta
ttgtcaattctaacagatatgggaccttggtgcgcacaacaagcagcactcacaatggta
tcgaaaatagagaaactcaaaattaaagtaccctatgaaaggcactttcttcttttatgc
atggtctctacagtgttagtgaaaatttattcaatttgtgaaaattatatgaaagactta
tcagacactgagaaaattttgaagttttccacgtctaaggtattgaggtatttggagata
ctgaaaaaattcaagccaaaaattgagaaaacggatgctcaagaagtgattccagaacaa
ggaagggagattgaagttaatgcaagacctagaaaaggcggtcgagttccgagaaggctg
tttgttcaaaaaaatcaaacagacgattccatttgttgtctgactttcgtccatgatcgt
tacagagctaaagttctattcaatctattgtgtgttatgtcacaaaatcacgaagattat
atttggatctcgacgcaatacgctgtagagaagacagcggatcctgcgaaagaaatgaaa
gaagctgaaatggagcataaacagcatgaagaggtgttgagaaagtatcgtgctcacgaa
gtcaatataatgatatccacttttgtacttgaacacggctgtgatttacctagatgcaat
ttagtcgtaagattcgatttgccggagatgttccatagttacatacagagcaaagcgaga
gcgagggcatctcatgcgcatttcgtttcacttgtgaacgaagacaacaccatggatttc
gttggaaagttgtcccaatataatgaaattgaaaatattctcttgaagagatgttgcagt
ttggaaccggagaaggaggaggagcattatgccaacagtttttcagcactttgcgaacca
tatcaaccgctaaagcaagaagggtcaccgtctgtgacgctctcgaatgctgtaacatta
ataaacaaatactgtgccaaattaccgagtgatacgttcactaaattaactccgatttgg
ggggaggaaaaaattaaagaaggttatatttgtcgaataaggctaccaattaactcacca
gtgaaagaaacaattctcagtcccccgatgtataatagtctgttggctagaagggcggca
gctttcatggcctgtcaattgttgcacaaaactggggagttggatgataatcttcagcct
ataggaaaggaaaattttgtcgctagtgaggaagattggaatacgtttcctttggatgag
gcggacgaggagctggcgcgtgaaaatgtagaaccgaggccaggaacgacgaaacgaagg
cagtattactataaaaaagtcgcggatgcgctcttgagttgtcacccagtggctggagaa
cggagttatttctacaaaattgtaatgactctcacctgtcccttgccagaagaacagaac
acacgaggcagaaaaatataccctcctgaagattttccccagagtttcggtattttgacg
tctaaaaaaattcccaagataagttctttcccgatattcactagatcaggggaagtgagt
gtagatttggagttgtgttccagcaatatcgttttaacgacgaaacaaatttcacaactg
agggaatttctgaattacacgttcaccagggtgttgagactgcagaaatacctgatgctt
ttcaatccggattcatcgttgaattcgtatctcgtcgtaccaaccaactcgaattcgatc
aacaacactgtgatcgattggaatttcgtggaattgataaatgaaaatctgaccattctt
cccgaaatcgtgccagaggagaaacgtgcaaattacaatttcgatccgaagaaatacgag
gatgctgtggtgatgccttggtaccggaaccaagaccaaccgcaatatttttacgtcgcc
gaaatatgtaaaaatctgagtcctaaatcgtctttccctggatcggaatacgccaccttc
gaagaatactacctgaaaaaatacgatatccagatacagaatttctctcagcaccttcta
gacgtggaccatacgtcggcaaggttgaatttcttaacgcccagatatgtgaacaggaag
ggggtggctttgccgacgagtagcgaggagactaagagggccaagagggagaacttggaa
cagaaacagattttagtacccgaattgtgtgctatacaccctttccctgcgtctttgtgg
cgtaaggcggtttgtctcccctgcattttatatcggatcaacgcgcttctactggcggat
cagataagaaaaactgtggctgtcgaattgttgctgggaaccgcggaactcgaggaacat
ttcaaatggcccgctttgaatttcggctggagcctttgcgacgtcataaaaaaatccaag
gaggacgaggcgaagcaggacgaaaaacctgaggaaattgaaatcgaaaaggccgaaatt
atcgaggatttcgatgttgaaatagcggaaatcaccgataaaatcgacgatgacaaatcg
agctggaacatcggaacctggtcgaacgacatggccggttccaacgaggatggtgaattg
acgataaaatatagttcccccacaagctggatggtagcagacgattatgacgactacact
tcttcggagtcctcgtactctgacgatgattccaacgacgatatcggtggttgtcggata
gaattcaccggcaattatctagcagaagcagtcgattcggaagaagttaaagaagtcgtt
acctcgaaacagtgcgttagcgtttggtccgatatcaactgcagtttgaaaaatgtcgaa
gaattacaacagaaattcaacgaagcctgtattagaaataagaaaaacattctgaactcc
ggaatgttgttgaagaaagatcaagaattcactaagaacgaggagttgcacaacacgccg
aaaattcacgaaaacggtatggtgtcaaacttcgacttcaatcagctgatcgttaatcct
cgtaaacccatttatagcccgaaaaaattccgaaaaaccagatacaactgtgatattata
gactctagtacattcaagttcgacgcacaaccttcattagaaaaccaccctggtcccagt
ccgaatctgctgctgcaagctttaacgatgtcgaacgccaatgacggcatcaatttggaa
cggttggaaaccataggagactcgtttttgaaatacgccatcaccaactatctctactcc
aagtacgaaaacattcacgaggggaaactgagccatttacgctccaaacaggtcagtaat
ttgaatttataccgtttagggaagaggaaaaacttgggggaattcatgatcgccaccaag
ttcgaccctcacgacaactggttgcctccctgtttctacgtgccgaaagaactggaagag
gctttgctggccgctcagtaccccgccaactgttggacgatggccgacatggaggctacc
agggacatgacgttggaggatatttgttctatggttaaagaaaagggcgaagaaattgca
tttccaaactccataccgtacaatttggtaactcagcacagtataccggataaaagcatt
gccgactgcgtggaagctctaatcggcgcatatttgattgattgcggaccaagaggtgcc
ctattgttcatgacatggttgggtataaaagttttacctcagataagtgataatacctac
ggtgaatttgaactacctcattccccccttctcaggcatctacctaactcgcaggaagaa
ttagaagttttgctggatggttacaacgagtttgaacgacacatcggatacaaatttaaa
gaccggtcgtatttacttcaggctttgacccatgcttcttattcaccgaacagaataacc
gattgttatcaacgtttggaatttttaggagacgccgtactagattacctaatcacgaga
catctttatgaagattctaggatgcattctccaggagctctcaccgacttaagatcggcg
ttggtgaataacacaatattcgcgtctcttgcagtcagaaatggattccataaatatttt
cgacatttgtcgccaggtttgaatgaagtaatcgaaaaattcatcagacttcaggaagaa
tgtggccacagcctggtggaagagctatttctcgttatagaaactgatgcggaggaggtg
gaagacgtcgaagtgcctaaagcccttggagatattttcgaatcggtggccggggccata
ttcttagattcggaaatgtccctggatgccgtgtgggaggtttatcataaaatgatgcag
gcggaaatagaacaattcagcaacaaagtaccaaaatcgccaataagggagttattggag
ctcgaaccggagaccgctaaatttggaaagccggaaaagttggcggacggaaggagagtg
agagtttcggttgaagttttcggaaaagggacgttcaagggtattggaaggaactatcgt
atagcgaaatgtactgcagctaagtgtgctttgaagcatttgaaaagacaagggttggtc
agaagaaacgagtga
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integrated database retrieval system
