Coccinella septempunctata (seven-spotted ladybird): 123307620
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Entry
123307620 CDS
T07873
Name
(RefSeq) ATP-dependent RNA helicase Ddx1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cset03041
]
123307620
03016 Transfer RNA biogenesis [BR:
cset03016
]
123307620
Enzymes [BR:
cset01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123307620
Spliceosome [BR:
cset03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
123307620
Transfer RNA biogenesis [BR:
cset03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
123307620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
ResIII
Band_7_1
Ribul_P_3_epim
Cas3-like_C_2
LpxI_N
Motif
Other DBs
NCBI-GeneID:
123307620
NCBI-ProteinID:
XP_044745938
LinkDB
All DBs
Position
2:complement(43999954..44003340)
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AA seq
727 aa
AA seq
DB search
MTAFEEFGVLPEIAKALEELDWMLPTDIQAEGIPLVLGGGDVLMAAETGSGKTAAFCLPV
IQIVWETLKDLEKGTGSKKLSVPWTMSMYDRGNALAVAPGGLRVQSREQREWHGTRCTTG
VKSGKWGFEATVTDEGLCRVGWSTLQSSLDLGTDKFGFGFGGTGKKSNNKQFDNYGEPFG
KNDVITCLLDIESGTIKFLKNGVDLGQAFTINKQVVKAFFPAVVLKNAEMAFNFGETELK
YPLPPNYKPICQASDTEIAINTNEEASDPNSAPVLKSNAPQAIIIEPSRELAEQTCEQLK
KFKKYLDNPKIKELLVIGGVNVKDQIFQLQNDGADIIVGTPGRLEDLIQGGYLSLSSCRF
FILDEADGLLKQGYTDLIERLHRQMPKVTSDGKRLQMIVCSATLHAFEVKKMAEKLMYFP
TWVDLKGEDAVPDTVHHVIVKVDPQQDRSWHNLRRRIQTDGVHANDGVRPGNNCAETLSE
AVKLLKGEYCVRAIDVHKMDRAIIFCRTKIDCDNLERYLKNIDKNKYSCVCLHGDRKPHE
RKANLEKFKRQEVKFLICTDVAARGLDITGLPFMINVTLPDEKSNYVHRIGRVGRAERMG
LALSLVSTVPEKVWYHGEWCKTRGRNCWNTNLTDVKGCCMWYNEPQYLADIEEHLNITIT
QVDTDMVVPADEFDGKVVYGQKRKAGGSNYQNHTAQMAPIVKELTKLESNAQLIYLNRHL
TKFAKVA
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgactgcttttgaagaatttggtgttcttccggaaatcgcgaaggctctggaggaacta
gactggatgttaccaaccgatattcaagcagaaggaatccctttagtccttgggggagga
gatgttttgatggcagcagaaacaggaagtggaaagactgctgcattttgtcttccagtg
atccaaattgtctgggaaactctgaaagatttggaaaaaggcacagggtctaaaaaattg
tctgtgccatggacaatgtctatgtatgataggggaaatgcattagctgttgctcctggt
ggactgagagttcagtcgagagaacagagggagtggcatggtacgcgttgtactacaggt
gttaaaagtggaaaatggggatttgaagccactgtaacagatgaaggactatgcagagtt
ggttggtccacattacagtcttcattagatcttggaactgacaaattcggttttggtttt
ggaggaactggcaaaaaatcaaataataaacaatttgataattatggagaaccatttgga
aagaatgatgttataacatgtttgctggatatagaaagtggaacaattaagttccttaaa
aatggggtggatcttggacaagctttcactatcaacaaacaagtagtaaaggctttcttt
cctgctgtggttcttaagaacgctgaaatggctttcaattttggtgaaactgaattgaaa
tacccactacctccaaattacaaaccaatttgccaagccagcgatacagaaattgccata
aacacaaatgaagaagcctcagatccgaacagtgcacctgttctcaaaagcaatgctcca
caggcaataatcatagagcctagcagagaattggctgaacaaacttgtgaacagctgaaa
aaattcaagaaatatcttgataatccaaaaataaaggaactattagtaattggtggtgtg
aatgtaaaagatcaaatttttcaactacaaaatgatggtgctgatatcatagtaggcacg
ccaggtcggttagaggatcttatccagggaggttacttatctctatccagttgtcgattt
ttcattcttgatgaggctgatggtttgttaaagcaaggttatacagatctcatagagaga
cttcataggcagatgccgaaagtaaccagtgatggtaagagacttcaaatgattgtatgc
agtgcaactctccatgctttcgaagttaaaaaaatggcagaaaaactcatgtatttccct
acttgggtggatctcaaaggggaagatgcagttccagataccgtacatcacgttatagta
aaagtggaccctcagcaagaccgaagttggcacaatttgcgccgtcgcatacaaacagac
ggagtacacgcgaatgacggggtccgacctggtaataattgtgccgaaactcttagtgaa
gccgttaagctcctcaaaggggaatattgtgttcgagctatagatgtccacaaaatggac
agagcgattatattttgcaggacaaaaattgactgcgacaatctagagagatatctgaag
aatattgataaaaataaatattcttgtgtctgtcttcacggtgataggaagccacacgag
aggaaagccaatttggagaaattcaagagacaagaagtgaaattcttgatttgtactgat
gtagcagccagaggattggatatcacaggtttaccattcatgatcaatgttacacttccc
gatgagaaatctaattatgtacataggattggacgtgttgggagagctgaaagaatgggt
ttggcgttgagtttagtgagcacagtcccagaaaaggtttggtatcacggagagtggtgc
aagactagaggtcgtaattgttggaataccaacctaacagatgtgaaaggctgttgtatg
tggtacaacgagcctcagtatttggcagatatcgaggagcatttgaatataacaattacg
caagtagatacagatatggttgtcccagctgacgaattcgatggtaaagtagtttacgga
cagaaacgcaaagctggtgggtctaactatcaaaatcacactgctcaaatggctcctatt
gtgaaagaattgactaaattagagagcaatgcacaactcatttacctgaatagacacctg
acaaagtttgcgaaagttgcgtga
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