Coccinella septempunctata (seven-spotted ladybird): 123308307
Help
Entry
123308307 CDS
T07873
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset04137
Mitophagy - animal
cset04140
Autophagy - animal
cset04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123308307
04137 Mitophagy - animal
123308307
04148 Efferocytosis
123308307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cset03000
]
123308307
Transcription factors [BR:
cset03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
123308307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
PAS
PAS_9
PAS_4
HIF-1a_CTAD
HLH
Motif
Other DBs
NCBI-GeneID:
123308307
NCBI-ProteinID:
XP_044746844
LinkDB
All DBs
Position
2:complement(46434006..46514000)
Genome browser
AA seq
837 aa
AA seq
DB search
MSNLTSVFALDPPDVDSNSCSSASSGQYSGRINPNSLLANLIPPCQKEQDWDYDQCYSYY
ANGCYNTCQFVKFGDIEDFMNNEKRKEKSRDAARCRRSKETEIFADLAAALPVSQEQVAQ
LDKASIMRLAISYLRVRDMINLIPALPVSEKDVKADESTFLKSLEGFLLVLSNDGDIVYL
SENVSDYLGIGQIDLMGQNIFDYSHPCDHEEIRELFSDKAKDDGNDSQKSLFIRLKCTLT
SKGRNVNLKSATYKVLHLKGHILRAAPSENDVDQKLKNCYAAIANPIPHPSNIESPLPKQ
TFVTKHSLDMKFIHADDEIMKDVLGYYEEELLGKSVYEYHHAMDSDSIISAYKCLFSKGQ
CETSKYRFLAKNGGYVWVMTQATLLYDKVGKPQNVVCVNYVISGVECENEVYSASQLSCV
TEDDLSTKIEDSEVVLLEEVPLEVDEEDPELRDSFLDGDGLLGPKRNTQKILTQRTEEMS
RGFLTFTEDSGLTMLKEEPDDLTHLAPVASDVCVPLEDHPFLSEVFDDLLLKDNFSPLMM
DEPLDPFISYRDTYDMSPELLSPTLSKNYDSSLPSLNSPSNSLGEDDHIPSFVNYPVEDD
KLDSSIRPGSPYIPMSMDDLPLLLSSSNDLMWSNSSSPIPPSPTSCKTTSDSSLAQLLST
TVKTTTKSNAIELGQSLRSEGTTTSHSNKRSSSSSTSPSSKRMRTEQPKDKVSSELLHQL
ISNNGANGRGQRKKSSWLLDSQKATCVSQPSDSVLMNLLETNTLRRKIIRQQTSGSNLHR
YLLRVNSKSLLVPETQHQPITSLLTLTDKDYEVNAPVNSGLLQGEDLIRALEICDTI
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccttacgtccgtcttcgcgctggatccaccagacgtggactcgaactcttgt
tctagcgcctcctccggtcagtactcgggccgtatcaatccgaacagccttctggccaac
ctgatcccgccctgtcagaaggagcaagactgggattacgatcagtgttacagctattat
gcgaacggctgctacaacacctgccagttcgttaaattcggcgatatcgaggatttcatg
aataacgagaagcgcaaggaaaagtccagagatgctgcgagatgtcggcgatccaaagaa
acagagatattcgcagatttggctgctgcgctgccagtgtcacaagagcaggttgctcag
ctggacaaggcctcgataatgagattggccatatcgtatcttcgtgttagggatatgata
aacctgatacctgcgttacctgtatcggaaaaagatgtaaaagcagacgaatctactttt
ttgaaatctttggagggatttctcttggtcctgtccaatgatggggatatcgtctacctc
tctgaaaacgtcagcgattacctaggaatcggacagattgacctgatgggccaaaacata
tttgattacagtcatccctgcgatcacgaggaaattagggagctattttcggataaagcg
aaagacgatggaaacgattctcagaaatccttgttcatcaggttgaagtgcaccctcacg
agcaaagggagaaatgttaatttgaagtcggcaacctacaaggttctacacctcaaagga
cacatattgagagctgctcctagtgagaacgacgtcgatcagaaactcaagaattgctac
gcggccattgcgaatcccatacctcatccgtctaacattgaatcgccgttaccgaaacaa
actttcgtgactaagcatagtttggatatgaaattcatccatgccgacgatgagattatg
aaagatgtccttggatattatgaggaggaactcctaggaaaatcggtatacgaatatcat
catgccatggacagcgattccatcatttctgcgtacaagtgtttgttttcgaaaggacaa
tgcgagacttcaaaatacagattcctggcaaaaaatggcggttatgtgtgggtgatgacg
caagcaacgttgttatatgacaaagttggaaaaccccaaaatgtcgtgtgcgtcaattac
gtcataagtggcgtcgaatgcgaaaatgaagtctattcggccagtcagttatcttgtgtg
accgaggacgatctgtcgacgaagatcgaggactcggaggttgtgctcctcgaagaggta
ccgctagaggtggacgaggaggatcccgagctgcgggacagcttcctggacggcgacggt
ctcctgggaccgaaacgcaacacgcagaagatcctgacgcagaggacggaggagatgagc
aggggtttcctcaccttcaccgaagattctggattgacaatgctgaaggaggaaccggac
gatttaacacatttggccccggtggccagcgacgtatgcgtccccctcgaagaccaccca
ttcctctcggaagtgttcgatgatctcttgctcaaggacaacttcagcccgctcatgatg
gacgagcccttggacccgttcatctcttacagggacacgtacgatatgtcgccggaactc
ctgtcgccgacgctatcaaagaactacgactcaagtctgccctccctgaacagcccgagc
aattccttgggcgaagacgaccacatcccctccttcgtcaactaccccgtagaagacgac
aaattggactcttccatcaggcccggttccccctacattccaatgagcatggacgattta
ccgctcctcctgtcatcgtcgaacgatctcatgtggagcaacagcagcagtcccataccc
ccaagtccgacgagttgtaagaccacgagcgacagtagtttggcgcaattgttgtcgacg
acggtcaaaactacgacaaagtcaaatgccatagaactaggtcaatcgttaaggtcggaa
ggtaccaccacatctcacagcaacaaacgatcgagttccagcagcaccagcccatcgagt
aaaaggatgaggacggaacagccgaaagataaggtctcttcagaactcttgcatcaatta
atttcgaataacggcgcgaacggccgtggtcaacggaaaaaatcgagctggttgctggac
agccaaaaggccacgtgcgtaagccagcccagcgatagcgtcctaatgaacttattggaa
acgaacacattgaggaggaaaatcatccgacagcaaacttcgggctcgaatttacaccgt
tacctactcagagtcaactccaaatctcttttggtccccgagactcagcatcaacccatc
acttcgctcttgaccctcaccgataaggactacgaagtgaacgcccccgtcaatagtggt
ctcctccagggagaagacctaattagggctttagagatctgcgacaccatttag
DBGET
integrated database retrieval system
