KEGG   Coccinella septempunctata (seven-spotted ladybird): 123308545
Entry
123308545         CDS       T07873                                 
Name
(RefSeq) roquin-1
  KO
K15690  RING finger and CCCH-type zinc finger domain-containing protein
Organism
cset  Coccinella septempunctata (seven-spotted ladybird)
Brite
KEGG Orthology (KO) [BR:cset00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cset03000]
    123308545
   04121 Ubiquitin system [BR:cset04121]
    123308545
Transcription factors [BR:cset03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    123308545
Ubiquitin system [BR:cset04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    123308545
SSDB
Motif
Pfam: Roquin_1_2-like_ROQ ROQ_II zf-RING_UBOX zf-RING_5 zf-CCCH zf-C3HC4_4 Lebercilin zf-C3HC4 zf-RING_2 PaaA_PaaC Vesi_VP2 zf_CCCH_4 Prok-RING_4 COG6_N zf-RING_6 Sina_RING
Other DBs
NCBI-GeneID: 123308545
NCBI-ProteinID: XP_044747194
LinkDB
Position
1:complement(60679334..60696922)
AA seq 891 aa
MPIQAPQWTEFLSCPVCCHTFDGALRSPISLGCGHTICKACLSNLHRKQCPFEQNVISID
IENLPINTALLQLIIPLNKSEHEETIDLKIIPREFTSLYLTSKKCVEKLALYLKPFPNGS
VSGGGSILSRPMQRKLVTLINCQLVEDEGRTRAMRAARSLGERTVTELILQHQNPQQLSN
NLWAAVRARGCQFLGPAMQEEVLKLVLLALEDGSALSRKVLVMFVVQRLEPHFPQASKTS
IGHVVQLLYRASCFKVSKREGDSSLMQLKEEFRTYEALRREHDAQIVQIATEAGLRIAPD
QWSALLYGDTAHKSHMQSIIDKLQTPQSFAQSVQELLIALQRTGDPGKLSALRPHLELLA
AIDPSAESATPSWKEFSEALEAVQQVVAGLVDFIHQYGNRKLQDTTHSQHAKYKISMCRD
LTLRGSCPRSTNCTFAHSNEELEKYRAKNRKSMIRNKEHRIDSQSPSDKNYNQPEDYYTP
VPNTAAPSPVSMPSMVPGMVQGMSYDVPPYSANYLRSNQHHSTPQQMYANSIGHFSPHEM
YGNNQQNVMVSSNNGQNYFPSPEFADLNRPNMPAETTRSINWDISKNQNLPIQPKLPRGQ
GKSLAELYQRKQEVISLLEKVVGKNAATAISNDATTLARQESQIDMDSPSSPYSFLPPHI
NTGPTFVRSDSILTPDDDYVPYDSPSINKYGPISRMHKDNNLNQSTSFRDSSLPSNMAHR
PMSSGSPLTSLYYNNNPQIYPPNIPQGAFVPSGNVMSPQYLHMHPRMQDHSKEIMAESQR
VSMQLRNLEKQLKDLNKLAAQKIPNLSESDKLTQELQLIEQGIHEKQKEACLNRIVNSWN
LTMNANVAPGPSEDTMYEDDIANDMKELELRWKEELEEQEKRWSSEDDSNK
NT seq 2676 nt   +upstreamnt  +downstreamnt
atgcccatacaggcaccacagtggacggaatttctgtcttgtccagtatgttgccacaca
tttgatggagctctaaggagtcccataagcttaggttgtggacatacaatatgcaaggca
tgtttatcaaacttacatagaaagcaatgcccattcgagcaaaatgttataagtatagac
atcgaaaatttaccaatcaacacagctttacttcaacttattataccattgaataagagt
gaacatgaggaaactatcgaccttaaaatcataccaagggagttcacaagtttatatctc
acttctaaaaagtgtgttgaaaagttggctctctatctcaaaccatttcctaatggaagt
gtatctgggggtggtagtatactttcgaggcctatgcaaaggaagttggtcaccttgata
aattgtcaacttgttgaggatgagggaagaaccagagcaatgagagctgccaggtctttg
ggggagagaacagtgacggaattgattttacaacatcagaacccccagcagctgtctaat
aatctttgggctgctgttagagccagaggttgtcagtttctaggtcctgctatgcaagaa
gaagttttgaaattggtactgctagctttggaagatggatcagctttatcgaggaaagtt
ctagtgatgttcgttgtgcagaggctagaaccccattttcctcaagcctcaaaaacaagt
attgggcatgttgtgcaacttttatacagagcttcatgctttaaggtttcaaagagagag
ggcgattcatccctgatgcaactgaaagaggagttccgtacgtacgaagcgctacgaaga
gaacacgatgcacaaatcgtacaaatcgcgacggaggccggtctgagaatagccccggat
cagtggtccgctctgctgtatggcgacaccgcccataagtcgcacatgcagagcatcatc
gataagttgcagacgccgcagtccttcgctcaaagcgtgcaggaactacttattgcactc
cagagaacgggggatccgggaaagctgtcggctctgaggccccacctggaacttctggct
gcaatagacccaagtgcagaatctgctacaccgtcttggaaggaattcagcgaggcccta
gaagcggtacaacaagtggttgcaggtcttgtggatttcatccatcaatacggaaaccgt
aaacttcaggacaccacccattcccaacacgctaaatataagatcagtatgtgtcgtgat
ctgactcttaggggcagctgtccaaggagtacgaactgtacctttgcccattcgaatgag
gagctggagaagtacagggcgaaaaatcggaaatctatgattaggaacaaggaacacagg
atagacagccagagcccatccgacaagaactataaccagcctgaagactattacacgcct
gtaccgaataccgcggcgcccagtcctgtatccatgccttccatggtgccgggaatggtt
caagggatgagttatgacgttcctccttacagcgccaattacctgagatcgaatcagcat
cactctacgccccagcaaatgtacgctaacagtattggtcatttttcaccgcacgaaatg
tacggtaataaccaacagaacgtgatggtttcttcgaacaatggccagaactattttcca
tctccggaattcgccgatttgaatcgtcctaatatgccagcggagactaccagatccatc
aattgggacatttcgaagaaccaaaacctaccgatccaaccgaagttacctcggggccag
ggaaagagtctcgccgaattatatcagcggaagcaagaagtaatttctctgcttgagaaa
gtcgttggaaagaacgcggcaactgcgatctctaacgacgctactacactggcacgtcaa
gagtcccaaatcgatatggatagcccgtcgtcgccctatagctttctgccgccccacatc
aacaccgggccgacgtttgtcagatcggattccattctgacgccagacgacgactacgtg
ccgtacgattcgccgtcgatcaacaaatacggtccgatttccaggatgcacaaagacaac
aatctgaatcagtcgacttcgttcagggattccagtttgccgtcgaatatggcccataga
ccaatgtcatccggcagtccgctaacctcactctactacaacaacaatcctcagatatac
ccgccaaatattccacaaggagcatttgttccatcaggaaacgtgatgagtcctcaatat
ttgcatatgcacccgaggatgcaggatcattccaaagaaataatggccgaatcccaaagg
gtcagcatgcagttgcgaaatttggagaagcagctgaaggatctgaacaagttggcggca
caaaaaattcccaatctaagtgaaagtgataagctcacccaggagttgcaattgatcgaa
cagggaattcatgagaaacagaaggaggcatgtttgaaccgtattgttaattcatggaac
ttgacgatgaatgccaatgtggcacctggaccatccgaggacaccatgtatgaagacgac
attgccaacgatatgaaagagctagagcttcgttggaaggaggaacttgaagaacaggaa
aaacggtggagcagcgaggacgactccaacaagtaa

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