Coccinella septempunctata (seven-spotted ladybird): 123309377
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Entry
123309377 CDS
T07873
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Pathway
cset03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123309377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cset03019
]
123309377
Messenger RNA biogenesis [BR:
cset03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
123309377
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
123309377
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GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
123309377
NCBI-ProteinID:
XP_044748400
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Position
3:24683086..24684618
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AA seq
298 aa
AA seq
DB search
MPRQIQIRSASNRVDTSVAVDREESHPAIYTPGQIITQQNGFMRGHGTYEEDGVLKASVA
GVQEKVNNLISVRPLKSRYNGEIGDVVVGRITEVQQKRWKVNTNARLDSVLLLSGVNLPG
GELRRRSAEDEHMMRKYLQEGDLISAEVQSIFSDGSLSLHTRSLKYGKLAQGFLVKVSPS
LIRRSKTHFLKLQIGINLILGTNGFIWIYPFSNDSDESVGGFILNSEEVIPENVRIIMTR
VRQCILALAQSKIMLYDTSILFAYEESMKYSISQLIIPEAMVDIALLTQHRLILAENE
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgacaaattcaaatacgttcagcttcaaatagagtggacacaagtgtggctgtt
gatagggaagaatctcatccggccatttatactccaggacagattattactcaacaaaat
ggtttcatgagaggtcacggtacttatgaagaagatggagtactcaaggcatcagttgct
ggtgttcaagaaaaagttaacaatttaatttctgtacgccctttgaaaagtaggtataat
ggtgaaattggagatgttgttgttggtcgaataactgaagttcaacagaaaaggtggaag
gtgaatacaaatgctcgattagattctgttttattgctatctggagttaatttgccagga
ggggaattgagacggcgttctgcagaagatgaacatatgatgagaaaatatcttcaagaa
ggggaccttataagtgctgaagttcagagtatattttcagatggctctttatccttacat
actagaagtttaaaatatggaaagcttgcccaagggttcttggtgaaagtctccccctct
ctcattagaagaagtaaaacacattttcttaaattacaaattgggattaatctaattttg
ggaacaaatggtttcatatggatatatcctttttctaatgattctgatgaaagtgttggt
ggatttattcttaattcagaagaggtgattcctgagaatgtaagaataataatgactaga
gtgaggcagtgtattttggctttggcccagagtaaaataatgttgtatgatacaagtatt
ttgtttgcttatgaggaatcaatgaaatattccatatctcaattgattattcctgaagct
atggttgatatagcacttttaacacaacatcgtttgattttagctgaaaatgaatga
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